RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MUL1Q969V5 352 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 EDC3Q96F86 508 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 TMEM41AQ96HV5 264 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAR2Q96K12 515 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SELENOSQ9BQE4 189 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 STK33Q9BYT3 514 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 IFIH1Q9BYX4 1025 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC29A3Q9BZD2 475 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRIM2Q9C040 744 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 NUAK2Q9H093 628 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 GLT8D2Q9H1C3 349 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ADNPQ9H2P0 1102 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 HAUS4Q9H6D7 363 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ACAD9Q9H845 621 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ANKZF1Q9H8Y5 726 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 MOV10Q9HCE1 1003 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 PALMDQ9NP74 551 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 POLE3Q9NRF9 147 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 GJB4Q9NTQ9 266 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 GIN1Q9NXP7 522 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ASIC5Q9NY37 505 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 DLGAP2Q9P1A6 1054 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 LPAR3Q9UBY5 353 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP6V1HQ9UI12 483 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 ANAPC5Q9UJX4 755 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 AK9Q5TCS8 1911 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 NALCNQ8IZF0 1738 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 AFF2P51816 1311 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 MROH7Q68CQ1 1323 aa4.71□□□□□ -1.66
HMGB3P13-201ENST00000511263 USP54Q70EL1 1684 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CAMTA1Q9Y6Y1 1673 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 COL5A2P05997 1499 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CYP2D7A0A087X1C5 515 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 PNMA6EA0A0J9YXQ4 647 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 C1orf232A0A0U1RR37 186 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 C5orf60A6NFR6 353 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 WIPF3A6NGB9 483 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR5K4A6NMS3 321 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 LACTBL1A8MY62 500 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 GOLGA8SH3BPF8 625 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 STX16-NPEPL1H3BU86 382 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 INO80B-WBP1J3KQ70 363 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 AP5Z1O43299 807 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 HSF2BPO75031 334 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 NDST3O95803 873 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 FYNP06241 537 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 PCNAP12004 261 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 ABCB4P21439 1286 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 ACAT1P24752 427 aaKnown RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 EVI2BP34910 448 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 HTR7P34969 479 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 IL6STP40189 918 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 UBA7P41226 1012 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 HSD17B4P51659 736 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 HNRNPFP52597 415 aaKnown RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC12A2P55011 1212 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 VBP1P61758 197 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 GNG11P61952 73 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 RELAQ04206 551 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 FCHO2Q0JRZ9 810 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 MTAPQ13126 283 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 STX1AQ16623 288 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 NFIL3Q16649 462 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 MPEG1Q2M385 716 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CNPY1Q3B7I2 92 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 LEXMQ3ZCV2 418 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCNJQ5T5M9 372 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 C6orf183Q5T699 404 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 PXDC1Q5TGL8 231 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCDC144NLQ6NUI1 221 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF704Q6ZNC4 412 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCDC129Q6ZRS4 1044 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 MIER3Q7Z3K6 550 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 AKAP14Q86UN6 197 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAM133AQ8N9E0 248 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 GLIS1Q8NBF1 620 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 ADPRHL1Q8NDY3 354 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR8H1Q8NGG4 311 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR52L2PQ8NGH6 319 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 DNAJC9Q8WXX5 260 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRIM63Q969Q1 353 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 RPRD1AQ96P16 312 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 TSGA13Q96PP4 275 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCT8L2Q96SF2 557 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 SDF4Q9BRK5 362 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 ERP44Q9BS26 406 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 ISCA1Q9BUE6 129 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CRB3Q9BUF7 120 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 EFHD1Q9BUP0 239 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 CRNKL1Q9BZJ0 848 aaKnown RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRIM15Q9C019 465 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 NEK6Q9HC98 313 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 TMEM8AQ9HCN3 771 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 MRPL39Q9NYK5 338 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms