RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 STRA6Q9BX79 667 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 PREBQ9HCU5 417 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 C9orf78Q9NZ63 289 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 MARCH4Q9P2E8 410 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 OR14J1Q9UGF5 321 aa3.23□□□□□ -1.89
HMGB1P29-201ENST00000505659 A0A1W2PPH5 198 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 OR5K3A6NET4 321 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 PMS2P5A8MQ11 134 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 H3BQ06 376 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 ATP2A1O14983 1001 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 EDIL3O43854 480 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 SEC14L2O76054 403 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 WISP2O76076 250 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 UGT1A1P22309 533 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 UBA1P22314 1058 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 ARCN1P48444 511 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 HOXA1P49639 335 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 CASP6P55212 293 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 EEF1A1P68104 462 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 TBCEQ15813 527 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 DPCR1Q3MIW9 517 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 LRIF1Q5T3J3 769 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 EEF1A1P5Q5VTE0 462 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 NSUN5P2Q63ZY6 315 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 ARHGAP17Q68EM7 881 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 ANO5Q75V66 913 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 SDCCAG8Q86SQ7 713 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 THAP6Q8TBB0 222 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 GRAPLQ8TC17 118 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 HARBI1Q96MB7 349 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 TMEM68Q96MH6 324 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 PSMD1Q99460 953 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 LRMDAQ9H2I8 198 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 RANBP17Q9H2T7 1088 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 TFB2MQ9H5Q4 396 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 FKRPQ9H9S5 495 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 UPF2Q9HAU5 1272 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 RANGRFQ9HD47 186 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 MAP3K20Q9NYL2 800 aaKnown RBP3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 DLGAP2Q9P1A6 1054 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 STK39Q9UEW8 545 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 MAU2Q9Y6X3 613 aa3.22□□□□□ -1.89
HMGB1P29-201ENST00000505659 IGLV5-45A0A087WSX0 123 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 A0A1B0GVC2 190 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 KCNN4O15554 427 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 SYNGR3O43761 229 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 CTSVO60911 334 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 EIF3JO75822 258 aaKnown RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 ICAM1P05362 532 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 SPARCP09486 303 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 PATE4P0C8F1 98 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 PAX1P15863 534 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 CCR9P51686 369 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 NR0B1P51843 470 aaKnown RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 RPL7AP62424 266 aaKnown RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 TSTQ16762 297 aaKnown RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 WDR38Q5JTN6 314 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 LCN10Q6JVE6 187 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 ARHGAP11AQ6P4F7 1023 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 CEACAM20Q6UY09 585 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZNF704Q6ZNC4 412 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 Q75L30 129 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 GSTA5Q7RTV2 222 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 PIWIL4Q7Z3Z4 852 aaKnown RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 TSPYL6Q8N831 410 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 OR10V1Q8NGI7 309 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 OR1J2Q8NGS2 313 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 CTCFLQ8NI51 663 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 UTP15Q8TED0 518 aaKnown RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 SMARCE1Q969G3 411 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZKSCAN4Q969J2 545 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 PHF21AQ96BD5 680 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 ARHGEF26Q96DR7 871 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 EGLN2Q96KS0 407 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 DUX3Q96PT4 197 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 F2RL3Q96RI0 385 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 LITAFQ99732 161 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 TRPC7Q9HCX4 862 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 POLG2Q9UHN1 485 aa3.21□□□□□ -1.9
HMGB1P29-201ENST00000505659 A0A1W2PRG0 241 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 EIF4E1BA6NMX2 242 aaKnown RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 PRKNO60260 465 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 JRKO75564 520 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 BAG4O95429 457 aaKnown RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 LDLRP01130 860 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 ALDH4A1P30038 563 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 AHRP35869 848 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 MMP14P50281 582 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 MBTD1Q05BQ5 628 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 CSTF3Q12996 717 aaKnown RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 CCNG2Q16589 344 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 PNLIPRP3Q17RR3 467 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 MYLK3Q32MK0 819 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 ZNF805Q5CZA5 627 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 SEPT14Q6ZU15 432 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 SMC5Q8IY18 1101 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 DIS3L2Q8IYB7 885 aaKnown RBP3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 RASGEF1CQ8N431 466 aa3.2□□□□□ -1.9
HMGB1P29-201ENST00000505659 FAM76AQ8TAV0 307 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms