RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ZNF366Q8N895 744 aa11.26□□□□□ -0.61
SMPD4-218ENST00000482171 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
SMPD4-218ENST00000482171 PRR11Q96HE9 360 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-218ENST00000482171 EURLQ9NYK6 297 aa11.26□□□□□ -0.61
SMPD4-218ENST00000482171 CLCA2Q9UQC9 943 aa11.26□□□□□ -0.61
SMPD4-218ENST00000482171 CYP2A6P11509 494 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 LBPP18428 481 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CYP2A7P20853 494 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 MAPKAPK2P49137 400 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CBX2Q14781 532 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 PLCL1Q15111 1095 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CCDC80Q76M96 950 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 BORCS5Q969J3 196 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 SMG9Q9H0W8 520 aaKnown RBP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 EIF2B3Q9NR50 452 aaKnown RBP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 POLG2Q9UHN1 485 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 RAB26Q9ULW5 256 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 A0A0D9SEW6 157 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CLTBP09497 229 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 NR4A1P22736 598 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 SLC7A2P52569 658 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 RAD23AP54725 363 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 GALNT2Q10471 571 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 TREML1Q86YW5 311 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CHPFQ8IZ52 775 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 TMEM174Q8WUU8 243 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 SELENOMQ8WWX9 145 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CAPN10Q9HC96 672 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CCDC162PA2VCL2 907 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 FAM149AA5PLN7 773 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CSF2RAP15509 400 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 CCNA2P20248 432 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 JAK1P23458 1154 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 APLP1P51693 650 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 PRMT2P55345 433 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 IRF8Q02556 426 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 MPPE1Q53F39 396 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 ADGRF1Q5T601 910 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 RAET1GQ6H3X3 334 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 NPWQ8N729 165 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 PNPLA1Q8N8W4 532 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 ROGDIQ9GZN7 287 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 C6orf62Q9GZU0 229 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 SPAG4Q9NPE6 437 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMPD4-218ENST00000482171 ABCB8Q9NUT2 735 aa11.25□□□□□ -0.61
SMPD4-218ENST00000482171 DYTNA2CJ06 578 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 CCDC154A6NI56 674 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 SLC9A3R1O14745 358 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 AZIN1O14977 448 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 IPO13O94829 963 aaKnown RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 SLC25A14O95258 325 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 PRAMEF1O95521 474 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ANXA5P08758 320 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 CSKP41240 450 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 GK5Q6ZS86 529 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 TRPV1Q8NER1 839 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 STYXQ8WUJ0 223 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 GNPTGQ9UJJ9 305 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ASNA1O43681 348 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ZNF682O95780 498 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ASLP04424 464 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 HAPLN1P10915 354 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 HTR7P34969 479 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 MAPK8P45983 427 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ALDH9A1P49189 494 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 FRG1Q14331 258 aaKnown RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 CARTPTQ16568 116 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 INSCQ1MX18 579 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 TRNP1Q6NT89 227 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ABRAXAS1Q6UWZ7 409 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 GET4Q7L5D6 327 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 CPNE9Q8IYJ1 553 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 OR9Q1Q8NGQ5 310 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 FIG4Q92562 907 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 RORBQ92753 470 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 C8orf48Q96LL4 319 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ZNF778Q96MU6 729 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ACAT2Q9BWD1 397 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 F5P12259 2224 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 UBXN8O00124 270 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ZSCAN9O15535 394 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ITM2AO43736 263 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ZBTB11O95625 1053 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-218ENST00000482171 AHSGP02765 367 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ALPIP09923 528 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 FAM163BP0C2L3 166 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 GSSP48637 474 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 PRIM2P49643 509 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 VEGFBP49765 207 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 IDH3AP50213 366 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 ZNF461Q8TAF7 563 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 SH3GL1Q99961 368 aa11.24□□□□□ -0.61
SMPD4-218ENST00000482171 RAD21L1Q9H4I0 556 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms