RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CALML6Q8TD86 181 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 RAB7BQ96AH8 199 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF778Q96MU6 729 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 PAFAH2Q99487 392 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 FAM167BQ9BTA0 163 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 STMN4Q9H169 189 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ZFYVE1Q9HBF4 777 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 VPS18Q9P253 973 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 PSMC3IPQ9P2W1 217 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 FNDC3AQ9Y2H6 1198 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 FADS3Q9Y5Q0 445 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 CNOT1A5YKK6 2376 aaKnown RBP13.21□□□□□ -0.3
BRAT1-205ENST00000473879 SCN8AQ9UQD0 1980 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 A0A1W2PQU0 124 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 TLDC2A0PJX2 215 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-205ENST00000473879 SMIM23A6NLE4 172 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 SH3BP5O60239 455 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 VAPBO95292 243 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 INHBAP08476 426 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 PSMA3P25788 255 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 ATP5DP30049 168 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 HMGCLP35914 325 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 OVGP1Q12889 678 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 ZNF284Q2VY69 593 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 ZDHHC20Q5W0Z9 365 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 KIAA1161Q6NSJ0 714 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
BRAT1-205ENST00000473879 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 NAXDQ8IW45 347 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 PPM1NQ8N819 430 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 OR4K2Q8NGD2 314 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 OR13J1Q8NGT2 312 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
BRAT1-205ENST00000473879 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 DNAJC1Q96KC8 554 aaKnown RBP13.2□□□□□ -0.3
BRAT1-205ENST00000473879 SH3GL2Q99962 352 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 MED4Q9NPJ6 270 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 B4GALT6Q9UBX8 382 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 SLC2A6Q9UGQ3 507 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 ZFR2Q9UPR6 939 aaKnown RBP13.2□□□□□ -0.3
BRAT1-205ENST00000473879 ZNF106Q9H2Y7 1883 aaKnown RBP13.2□□□□□ -0.3
BRAT1-205ENST00000473879 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 ZFHX4Q86UP3 3567 aa13.2□□□□□ -0.3
BRAT1-205ENST00000473879 GOLGA8KD6RF30 607 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 H0Y8X5 98 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 AGPSO00116 658 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 TLR4O00206 839 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 AURKAO14965 403 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-205ENST00000473879 TSPAN6O43657 245 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 MAGEC1O60732 1142 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 PCDH8O95206 1070 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 C1QAP02745 245 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 TIMP2P16035 220 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 PMLP29590 882 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 SERPINB9P50453 376 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 CCT8P50990 548 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 NXPH1P58417 271 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 RPS21P63220 83 aaKnown RBP13.19□□□□□ -0.3
BRAT1-205ENST00000473879 ILF2Q12905 390 aaKnown RBP13.19□□□□□ -0.3
BRAT1-205ENST00000473879 SUZ12Q15022 739 aaKnown RBP13.19□□□□□ -0.3
BRAT1-205ENST00000473879 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.36e-7■■■■■ 34.8
BRAT1-205ENST00000473879 HSP90AA5PQ58FG0 334 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 LRRC66Q68CR7 880 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 DPPA4Q7L190 304 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 CNTN4Q8IWV2 1026 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 TMEM145Q8NBT3 493 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 OR13C4Q8NGS5 318 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 OR6P1Q8NGX9 317 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 HDAC10Q969S8 669 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 SMIM14Q96QK8 99 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-205ENST00000473879 CPNE1Q99829 537 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 ERVMER34-1Q9H9K5 563 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 RAD18Q9NS91 495 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 PKD2L2Q9NZM6 624 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 IL17CQ9P0M4 197 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 LGALS13Q9UHV8 139 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 ZNF180Q9UJW8 692 aa13.19□□□□□ -0.3
BRAT1-205ENST00000473879 IQANK1A0A1B0GTG1 560 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 A0A1B0GTQ1 180 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 H7C0S8 307 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 PSMD11O00231 422 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 FLRT2O43155 660 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CBFA2T3O75081 653 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CLDN7O95471 211 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 HNRNPA2B1P22626 353 aaKnown RBP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CNTFP26441 200 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 AKT2P31751 481 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms