RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 DGUOKQ16854 277 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 PCID2Q5JVF3 399 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 NOL9Q5SY16 702 aaKnown RBP13.68□□□□□ -0.22
NPHP4-207ENST00000470763 UBE2UQ5VVX9 321 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 LAIR2Q6ISS4 152 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 CCDC81Q6ZN84 652 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 PAPD5Q8NDF8 572 aaKnown RBP13.68□□□□□ -0.22
NPHP4-207ENST00000470763 SLC2A14Q8TDB8 520 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 CCDC126Q96EE4 140 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 ITCHQ96J02 903 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 BTN2A3PQ96KV6 586 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 NSUN5Q96P11 429 aaKnown RBP13.68□□□□□ -0.22
NPHP4-207ENST00000470763 FAM118AQ9NWS6 357 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 AASSQ9UDR5 926 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 TIMM22Q9Y584 194 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 ZNF99A8MXY4 864 aaPredicted RBP13.68□□□□□ -0.22
NPHP4-207ENST00000470763 KCNK2O95069 426 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 PCMT1P22061 227 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 MAP2K4P45985 399 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 HMGCS2P54868 508 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 HIST2H2ACQ16777 129 aaPredicted RBP13.68□□□□□ -0.22
NPHP4-207ENST00000470763 ZNF678Q5SXM1 525 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 GPR158Q5T848 1215 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 LDB1Q86U70 411 aaPredicted RBP13.68□□□□□ -0.22
NPHP4-207ENST00000470763 CNTN4Q8IWV2 1026 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 POC5Q8NA72 575 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 SH3RF2Q8TEC5 729 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 FICDQ9BVA6 458 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 NEK6Q9HC98 313 aa13.68□□□□□ -0.22
NPHP4-207ENST00000470763 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 NOTOA8MTQ0 251 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 SLC1A7O00341 560 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TBX1O43435 398 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TBC1D4O60343 1298 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 SPNP16150 400 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 MTHFRP42898 656 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 CCNA1P78396 465 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 POU4F1Q01851 419 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 EMX1Q04741 257 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 UNC50Q53HI1 259 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 RGMBQ6NW40 437 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 BLOC1S3Q6QNY0 202 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PTRH1Q86Y79 214 aaKnown RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 OR13J1Q8NGT2 312 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 CNIH3Q8TBE1 160 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 CALML6Q8TD86 181 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 BPIFB1Q8TDL5 484 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TEKT5Q96M29 485 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TRIM54Q9BYV2 358 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 RNF38Q9H0F5 515 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 SYCE1LA8MT33 242 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 GABARAPO95166 117 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 UMPSP11172 480 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 IMPDH1P20839 514 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 DNAJB1P25685 340 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 ALDH7A1P49419 539 aaKnown RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PLIN5Q00G26 463 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 KCNAB2Q13303 367 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 NOMO2Q5JPE7 1267 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 GLYATQ6IB77 296 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PIM3Q86V86 326 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PIK3C3Q8NEB9 887 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 OR52K2Q8NGK3 314 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 MBOAT4Q96T53 435 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TBL1YQ9BQ87 522 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 FDXACB1Q9BRP7 624 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 SMOC2Q9H3U7 446 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TUBB1Q9H4B7 451 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 FBXO8Q9NRD0 319 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 LCTP09848 1927 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 NRCAMQ92823 1304 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 A0A1B0GTL3 188 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 EIF3FO00303 357 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 RFPL2O75678 378 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 SOAT2O75908 522 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 CDK14O94921 469 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 MYL3P08590 195 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 CYP2C8P10632 490 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 ICAM3P32942 547 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 FAM209AQ5JX71 171 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PDZD4Q76G19 769 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 ZDHHC13Q8IUH4 622 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PHYKPLQ8IUZ5 450 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 FAM86B1Q8N7N1 296 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 C2CD4AQ8NCU7 369 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 PPHLN1Q8NEY8 458 aaKnown RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 RPL3LQ92901 407 aaKnown RBP13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TXNDC15Q96J42 360 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
NPHP4-207ENST00000470763 IGKV6-21A0A0C4DH24 114 aa13.66□□□□□ -0.22
NPHP4-207ENST00000470763 TTC34A8MYJ7 566 aa13.66□□□□□ -0.22
NPHP4-207ENST00000470763 C1RP00736 705 aa13.66□□□□□ -0.22
NPHP4-207ENST00000470763 CHRNA1P02708 482 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms