RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	SPARCL1	Q14515	664 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	P3H1	Q32P28	736 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	SIRPB2	Q5JXA9	342 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	CERCAM	Q5T4B2	595 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	KDELC1	Q6UW63	502 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	GPR155	Q7Z3F1	870 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	GLT6D1	Q7Z4J2	308 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	C17orf82	Q86X59	251 aa	Predicted RBP	12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	KCNE4	Q8WWG9	221 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	MRGPRX2	Q96LB1	330 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	PPP1R2P1	Q96PQ5	205 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	TRIB3	Q96RU7	358 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	RIOK2	Q9BVS4	552 aa	Known RBP	12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	SPATA16	Q9BXB7	569 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	TEX101	Q9BY14	249 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	DPH1	Q9BZG8	443 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	ABCG8	Q9H221	673 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	BPIFA1	Q9NP55	256 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	APPL1	Q9UKG1	709 aa		12.63	□□□□□ -0.39
FDPS-204	ENST00000461507	HELZ2	Q9BYK8	2649 aa	Known RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	COL6A6	A6NMZ7	2263 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	PMS2P1	A4D2B8	440 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	PDE2A	O00408	941 aa	Predicted RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	BUD23	O43709	281 aa	Known RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	FGF1	P05230	155 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	ITGA2B	P08514	1039 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	RBMS1	P29558	406 aa	Known RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	TERF1	P54274	439 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	GNG11	P61952	73 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	OLIG2	Q13516	323 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	SLC1A5	Q15758	541 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	MARK2	Q7KZI7	788 aa	Known RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	TRIM74	Q86UV6	250 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	SLC35B2	Q8TB61	432 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	TBL1Y	Q9BQ87	522 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	LGR4	Q9BXB1	951 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	FRMD8	Q9BZ67	464 aa	Predicted RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	FAM83D	Q9H4H8	585 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	CYP4F12	Q9HCS2	524 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	MRPL40	Q9NQ50	206 aa	Known RBP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	SIRPG	Q9P1W8	387 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	GULP1	Q9UBP9	304 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	ACSL6	Q9UKU0	697 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	PCDHGA7	Q9Y5G6	932 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	SPO11	Q9Y5K1	396 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	CFAP46	Q8IYW2	2715 aa		12.62	□□□□□ -0.39
FDPS-204	ENST00000461507	PRSS38	A1L453	326 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	C5orf60	A6NFR6	353 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	TMX2-CTNND1	H3BSU7	103 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	RPLP0	P05388	317 aa	Known RBP	12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	PYGL	P06737	847 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	GLB1	P16278	677 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	GNPDA1	P46926	289 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	SPINT3	P49223	89 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	TMPRSS3	P57727	454 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	CDK3	Q00526	305 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	DPT	Q07507	201 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	SEPT6	Q14141	434 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	PARP6	Q2NL67	630 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	C14orf28	Q4W4Y0	310 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	PCSK4	Q6UW60	755 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	ZNF438	Q7Z4V0	828 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	TECPR1	Q7Z6L1	1165 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	B3GNT8	Q7Z7M8	397 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	PRUNE1	Q86TP1	453 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	NRSN1	Q8IZ57	195 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	GDAP1	Q8TB36	358 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	GPBAR1	Q8TDU6	330 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	TADA1	Q96BN2	335 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	MS4A14	Q96JA4	679 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	PBK	Q96KB5	322 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	GFM1	Q96RP9	751 aa	Known RBP	12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	LYSMD1	Q96S90	227 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	SRPK1	Q96SB4	655 aa	Known RBP	12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	AGAP2	Q99490	1192 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	TMEM168	Q9H0V1	697 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	LRRN3	Q9H3W5	708 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	CARS2	Q9HA77	564 aa	Known RBP	12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	MAGEE1	Q9HCI5	957 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	TRNAU1AP	Q9NX07	287 aa	Known RBP	12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	PKP3	Q9Y446	797 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	GCN1	Q92616	2671 aa	Known RBP	12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	MGA	Q8IWI9	3026 aa		12.61	□□□□□ -0.39
FDPS-204	ENST00000461507	LOC285095	A0A1B0GVY8	99 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	PGRMC1	O00264	195 aa	Known RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	AURKA	O14965	403 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	NUDT21	O43809	227 aa	Known RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	C1QL1	O75973	258 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	METTL18	O95568	372 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SOD1	P00441	154 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	CEACAM5	P06731	702 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	ETS1	P14921	441 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	CXADR	P78310	365 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	CCL7	P80098	99 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	NR1D2	Q14995	579 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	BROX	Q5VW32	411 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	PPP1R21	Q6ZMI0	780 aa		12.6	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms