RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IHHQ14623 411 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 UGT8Q16880 541 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 USP45Q70EL2 814 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 EXD1Q8NHP7 514 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 PRR7Q8TB68 274 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 TGM7Q96PF1 710 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 PLEKHG4BQ96PX9 1271 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 SNRNP25Q9BV90 132 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 RIOK2Q9BVS4 552 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 STN1Q9H668 368 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 SCHIP1Q9P0W5 487 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 LUZP4Q9P127 313 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 VPS18Q9P253 973 aa16.98■□□□□ 0.31
UBE2D4-209ENST00000454428 KIR2DS5A0A0G2JLQ3 304 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 A0A0G2JNG1 304 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 C21orf140B9A014 251 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 KIR2DS3K7RE56 304 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 TOX3O15405 576 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 ASMTLO95671 621 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 CASP14P31944 242 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 STC1P52823 247 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 POLR2FP61218 127 aaKnown RBP16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 DPYSQ14117 519 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 ZNF235Q14590 738 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 KIR2DS5Q14953 304 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 CAMK4Q16566 473 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 TPD52L1Q16890 204 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 JMJD6Q6NYC1 403 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 UCK1Q9HA47 277 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 NLRC4Q9NPP4 1024 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 PDZD2O15018 2839 aa16.97■□□□□ 0.31
UBE2D4-209ENST00000454428 FADS2P1A8MWK0 482 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 EIF3CLB5ME19 914 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 PES1O00541 588 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 MAFKO60675 156 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 KRT38O76015 456 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 UBXN7O94888 489 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 CCNYL3P0C7X3 344 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 NFKBIAP25963 317 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 HSPA9P38646 679 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 CCL11P51671 97 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 ARMC12Q5T9G4 340 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 FAM199XQ6PEV8 388 aaPredicted RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 SRRM1Q8IYB3 904 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 MLKLQ8NB16 471 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 THAP4Q8WY91 577 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 KLHL6Q8WZ60 621 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 C19orf60Q96EN9 201 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 EIF3CQ99613 913 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 ETNK2Q9NVF9 386 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 CWC15Q9P013 229 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 PCSK1NQ9UHG2 260 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 ADGRG1Q9Y653 693 aa16.96■□□□□ 0.31
UBE2D4-209ENST00000454428 A0A0J9YYE9 177 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 ARGFXA6NJG6 315 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 DAPK3O43293 454 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 CEACAM4O75871 244 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 TRBC1P01850 177 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 PYGLP06737 847 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 ELAVL4P26378 380 aaKnown RBP16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 PWWP2BQ6NUJ5 590 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 TMEM26Q6ZUK4 368 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 PRSS42Q7Z5A4 293 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 RBMXL3Q8N7X1 1067 aaKnown RBP16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 RSC1A1Q92681 617 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 ING2Q9H160 280 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 SAMSN1Q9NSI8 373 aaKnown RBP16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 ZNF624Q9P2J8 865 aaPredicted RBP16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 PCSK5Q92824 1860 aa16.95■□□□□ 0.3
UBE2D4-209ENST00000454428 ANKRD62A6NC57 917 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 OR5K4A6NMS3 321 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 KRT86O43790 486 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC2A4P14672 509 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 ZNF30P17039 623 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 XRCC1P18887 633 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 PTPN4P29074 926 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC19A1P41440 591 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 HCAR3P49019 387 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 CLCNKAP51800 687 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 PPP6R3Q5H9R7 873 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 RALGPS1Q5JS13 557 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 SLC6A19Q695T7 634 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 PPP1R3BQ86XI6 285 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 MFRPQ9BY79 579 aa16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-209ENST00000454428 CROCCQ5TZA2 2017 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 NUAK1O60285 661 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 RASSF9O75901 435 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 CBX6O95503 412 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 MT-ND3P03897 115 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 NELFEP18615 380 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 NR6A1Q15406 480 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 CHRNA6Q15825 494 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 DPCR1Q3MIW9 517 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 TCP11X2Q5H9J9 407 aa16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 HENMT1Q5T8I9 393 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-209ENST00000454428 DCUN1D2Q6PH85 259 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms