RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ARFGAP2Q8N6H7 521 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 ARFGAP1Q8N6T3 406 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 GBP7Q8N8V2 638 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SLC35F5Q8WV83 523 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 PSPC1Q8WXF1 523 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 MRPS27Q92552 414 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SNAPC3Q92966 411 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZKSCAN4Q969J2 545 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 NAPGQ99747 312 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 MXRA8Q9BRK3 442 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 LHPPQ9H008 270 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SCPEP1Q9HB40 452 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 FBRSL1Q9HCM7 1045 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SLC6A13Q9NSD5 602 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 HAUS2Q9NVX0 235 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 IFNKQ9P0W0 207 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 HEY2Q9UBP5 337 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CORO1CQ9ULV4 474 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 HS3ST3B1Q9Y662 390 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 A3GALT2U3KPV4 340 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 MYO5AQ9Y4I1 1855 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SPEF2Q9C093 1822 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CKAP5Q14008 2032 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SPATA31D1Q6ZQQ2 1576 aa4.53□□□□□ -1.69
HMGB1P16-201ENST00000447155 RFX7Q2KHR2 1363 aa4.53□□□□□ -1.69
HMGB1P16-201ENST00000447155 NALCNQ8IZF0 1738 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 UBN2Q6ZU65 1347 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 A0A0U1RQF3 1178 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 A6NCN8 305 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 SNAP23O00161 211 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 HNRNPCL1O60812 293 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 HSF2BPO75031 334 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 NDUFB8O95169 186 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 EPN2O95208 641 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TFPIP10646 304 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 DCTDP32321 178 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 HOXD13P35453 343 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 PPARGP37231 505 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 MAGEA8P43361 318 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 ME1P48163 572 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 PIP4K2AP48426 406 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 PPP3CCP48454 512 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CXCR3P49682 368 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 RASSF2P50749 326 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 C21orf58P58505 322 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 AKAP17AQ02040 695 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CSTF3Q12996 717 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 GRIK3Q13003 919 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 DYNC1I2Q13409 638 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMED1Q13445 227 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 OLIG2Q13516 323 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CAPSQ13938 189 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 FGFBP1Q14512 234 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 DUSP6Q16828 381 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TCTN1Q2MV58 587 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 ALG11Q2TAA5 492 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCDC57Q2TAC2 916 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 Q5PR19 223 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 MANEAQ5SRI9 462 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 PXDC1Q5TGL8 231 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 NAA16Q6N069 864 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 LRRC8EQ6NSJ5 796 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TTI2Q6NXR4 508 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 ARMCX5Q6P1M9 558 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TSSK4Q6SA08 328 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC16A12Q6ZSM3 486 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TRILQ7L0X0 811 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CEP57Q86XR8 500 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TDRPQ86YL5 185 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 ARHGAP12Q8IWW6 846 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 RNF168Q8IYW5 571 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 MMP21Q8N119 569 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TTC39CQ8N584 583 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 NANOGP1Q8N7R0 232 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 MAB21L3Q8N8X9 362 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TEX45Q8NA69 505 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 DRAXINQ8NBI3 349 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 ENGASEQ8NFI3 743 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM163Q8TC26 289 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 SCFD2Q8WU76 684 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 POMGNT1Q8WZA1 660 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 DHX58Q96C10 678 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 NSUN4Q96CB9 384 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 PABPC5Q96DU9 382 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCDC51Q96ER9 411 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 PLEKHF1Q96S99 279 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM79Q9BSE2 394 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 XPO4Q9C0E2 1151 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 CENPHQ9H3R5 247 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 BPIFA1Q9NP55 256 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 SMYD2Q9NRG4 433 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 DLGAP2Q9P1A6 1054 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 ABI3Q9P2A4 366 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 VPS28Q9UK41 221 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC45A1Q9Y2W3 748 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 AAR2Q9Y312 384 aaKnown RBP4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 MYH7P12883 1935 aa4.52□□□□□ -1.69
HMGB1P16-201ENST00000447155 A0A1W2PP64 1363 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms