RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CBWD3Q5JTY5 395 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 CBWD5Q5RIA9 395 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 EXOSC6Q5RKV6 272 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 PPM1LQ5SGD2 360 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 ERMARDQ5T6L9 678 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 LIN9Q5TKA1 542 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 IL23RQ5VWK5 629 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SLC8B1Q6J4K2 584 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM53Q6P2H8 277 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SHISA2Q6UWI4 295 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM184AQ6ZMB5 413 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 C15orf39Q6ZRI6 1047 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 INTS8Q75QN2 995 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 RAB11FIP2Q7L804 512 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 GLRX5Q86SX6 157 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 CILP2Q8IUL8 1156 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM139Q8IV31 216 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SCN4BQ8IWT1 228 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 DHX40Q8IX18 779 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 ULK2Q8IYT8 1036 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 AGGF1Q8N302 714 aaeCLIP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 AOPEPQ8N6M6 819 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 LRRC52Q8N7C0 313 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SCAIQ8N9R8 606 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 ATAD1Q8NBU5 361 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 GPR150Q8NGU9 434 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 MYCBPAPQ8TBZ2 947 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 DQX1Q8TE96 717 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 CTNNBL1Q8WYA6 563 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 CFHR4Q92496 578 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SUSD6Q92537 303 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SMG7Q92540 1137 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SEMA4DQ92854 862 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 ARHGEF2Q92974 986 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 GFM2Q969S9 779 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SLC35C1Q96A29 364 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 RPGRIP1Q96KN7 1286 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 MRGPRX4Q96LA9 322 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 RBM15Q96T37 977 aaKnown RBP eCLIP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 MMS19Q96T76 1030 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 FUZQ9BT04 418 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 HDAC8Q9BY41 377 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 PCDHAC1Q9H158 963 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SDCBP2Q9H190 292 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 XYLT2Q9H1B5 865 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 EPC1Q9H2F5 836 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 TP63Q9H3D4 680 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 DPEP3Q9H4B8 488 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 EPB41L1Q9H4G0 881 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SFXN1Q9H9B4 322 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 APOBEC3GQ9HC16 384 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 CD320Q9NPF0 282 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 SLC35C2Q9NQQ7 365 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 G6PC2Q9NQR9 355 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 RBM12Q9NTZ6 932 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 TMLHEQ9NVH6 421 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 RIC8BQ9NVN3 520 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 UBAP1Q9NZ09 502 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 PLA2G3Q9NZ20 509 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 HSFX1Q9UBD0 423 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 DNAJB9Q9UBS3 223 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 TCF20Q9UGU0 1960 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 HMGXB4Q9UGU5 601 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 ARMCX3Q9UH62 379 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 ADGRE2Q9UHX3 823 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 DAPP1Q9UN19 280 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 NOSIPQ9Y314 301 aaKnown RBP4.59□□□□□ -1.67
SF3B1-202ENST00000409915 L3MBTL1Q9Y468 752 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 FADS3Q9Y5Q0 445 aa4.59□□□□□ -1.67
SF3B1-202ENST00000409915 CCDC195A0A1B0GUA6 201 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SCO2A0A1W2PP80 73 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 SHISA3A0PJX4 238 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MYBPHLA2RUH7 354 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 RGSL1A5PLK6 1076 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 OR6C75A6NL08 312 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 C2CD4DB7Z1M9 353 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PYCARD-AS1I3L0S3 204 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PRRG1O14668 218 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PCDH17O14917 1159 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 MAPK13O15264 365 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 HNRNPRO43390 633 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 STX10O60499 249 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 OAZ2O95190 189 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CCNDBP1O95273 360 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ASS1P00966 412 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PDHA1P08559 390 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 DLDP09622 509 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ATF2P15336 505 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ACADSP16219 412 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 HOXB8P17481 243 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CD58P19256 250 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 IL1R2P27930 398 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 TNFRSF8P28908 595 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 GJA4P35212 333 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PPP1R2P41236 205 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 GARSP41250 739 aaKnown RBP4.58□□□□□ -1.68
SF3B1-202ENST00000409915 ASPAP45381 313 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 CAPZA2P47755 286 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 KCNJ5P48544 419 aa4.58□□□□□ -1.68
SF3B1-202ENST00000409915 PEX5P50542 639 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms