RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 PEX2P28328 305 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 NME5P56597 212 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 SEMG2Q02383 582 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 CDC16Q13042 620 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 ZNF423Q2M1K9 1284 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 Q6ZNB5 142 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 TRPC4APQ8TEL6 797 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 ZNF184Q99676 751 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 MID1IP1Q9NPA3 183 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 TMEM39AQ9NV64 488 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 RHBDL2Q9NX52 303 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 PAIP2BQ9ULR5 123 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 DENND4CQ5VZ89 1909 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 TCN1P20061 433 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 EEF1DP29692 281 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 PRDX3P30048 256 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 CDH18Q13634 790 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 HERC3Q15034 1050 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 C19orf60Q96EN9 201 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 TUBB1Q9H4B7 451 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 SEMA4BQ9NPR2 832 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 BTRCQ9Y297 605 aa15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 ARIH1Q9Y4X5 557 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-202ENST00000409472 SCN8AQ9UQD0 1980 aa15.08■□□□□ 0.01
SCAMP4-202ENST00000409472 PIP5K1BO14986 540 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 UBDO15205 165 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 SLC22A2O15244 555 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 FZD6O60353 706 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 CLASP2O75122 1294 aaKnown RBP15.08■□□□□ 0
SCAMP4-202ENST00000409472 FKBP6O75344 327 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 OLFM2O95897 454 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 GABRR2P28476 465 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 FASTKQ14296 549 aaKnown RBP15.08■□□□□ 0
SCAMP4-202ENST00000409472 UGT3A1Q6NUS8 523 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 LARP4Q71RC2 724 aaKnown RBP eCLIP15.08■□□□□ 07e-7■■□□□ 11.7
SCAMP4-202ENST00000409472 HERC6Q8IVU3 1022 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 BBS7Q8IWZ6 715 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 TCEAL8Q8IYN2 117 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 CD200R1Q8TD46 325 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 GDPD5Q8WTR4 605 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 FUBP1Q96AE4 644 aaKnown RBP15.08■□□□□ 0
SCAMP4-202ENST00000409472 POPDC3Q9HBV1 291 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 SARS2Q9NP81 518 aaKnown RBP15.08■□□□□ 0
SCAMP4-202ENST00000409472 TAS2R13Q9NYV9 303 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 HSFX1Q9UBD0 423 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 STK39Q9UEW8 545 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 RNF112Q9ULX5 631 aa15.08■□□□□ 0
SCAMP4-202ENST00000409472 OAS3Q9Y6K5 1087 aaKnown RBP15.08■□□□□ 0
SCAMP4-202ENST00000409472 BTN3A1O00481 513 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 STX7O15400 261 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 KERAO60938 352 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 LYNP07948 512 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 PSMA3P25788 255 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 HK3P52790 923 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 EPHB3P54753 998 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 XIAPP98170 497 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 GALNT1Q10472 559 aaPredicted RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 PTK2BQ14289 1009 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 GRB7Q14451 532 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 ARHGEF6Q15052 776 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 AGKQ53H12 422 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 PAOXQ6QHF9 649 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 C16orf89Q6UX73 402 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 TPGS1Q6ZTW0 290 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 KBTBD6Q86V97 674 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 CPNE9Q8IYJ1 553 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 PGAM4Q8N0Y7 254 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 DCBLD1Q8N8Z6 715 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 HJURPQ8NCD3 748 aaPredicted RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 KIAA1191Q96A73 305 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 TFB2MQ9H5Q4 396 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 GMPR2Q9P2T1 348 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 DNMT3BQ9UBC3 853 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 ZNF711Q9Y462 761 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 CHD9Q3L8U1 2897 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 A8MX80 341 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 ASLP04424 464 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 HSPA1AP0DMV8 641 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 HSPA1BP0DMV9 641 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 WDR5P61964 334 aaKnown RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 GEN1Q17RS7 908 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 AAGABQ6PD74 315 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 ST13P4Q8IZP2 240 aaPredicted RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 ZBTB8BQ8NAP8 495 aaPredicted RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 RHEBL1Q8TAI7 183 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 EEF1AKMT1Q8WVE0 214 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 TWIST2Q8WVJ9 160 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 SLC39A3Q9BRY0 314 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 YIPF2Q9BWQ6 316 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 ADGRE3Q9BY15 652 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 DERL2Q9GZP9 239 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 CCDC68Q9H2F9 335 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 TNKS2Q9H2K2 1166 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 RETREG1Q9H6L5 497 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 AKTIPQ9H8T0 292 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 SPG21Q9NZD8 308 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 EVLQ9UI08 416 aaPredicted RBP15.07■□□□□ 0
SCAMP4-202ENST00000409472 PCDHGA7Q9Y5G6 932 aa15.07■□□□□ 0
SCAMP4-202ENST00000409472 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 LCHNA4D1U4 455 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms