RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ADGRG1Q9Y653 693 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 CFAP46Q8IYW2 2715 aa17.57■□□□□ 0.4
HDDC3-201ENST00000330334 LOC285095A0A1B0GVY8 99 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 A6NCN8 305 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 OR5K4A6NMS3 321 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-201ENST00000330334 GRID2O43424 1007 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 MT-CYBP00156 380 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-201ENST00000330334 SLC2A4P14672 509 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 C16orf72Q14CZ0 275 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 TMEM164Q5U3C3 297 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 PCSK4Q6UW60 755 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 CCDC81Q6ZN84 652 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 CHST15Q7LFX5 561 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-201ENST00000330334 KDELC2Q7Z4H8 507 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 JAMLQ86YT9 394 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 AVL9Q8NBF6 648 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 SLC37A2Q8TED4 501 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 SH3KBP1Q96B97 665 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 PANX2Q96RD6 677 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 SPATA16Q9BXB7 569 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 GPR63Q9BZJ6 419 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 TRABDQ9H4I3 376 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 KCNK4Q9NYG8 393 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 ATXN10Q9UBB4 475 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 TBC1D29Q9UFV1 150 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 SHOC2Q9UQ13 582 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 ZNF711Q9Y462 761 aa17.56■□□□□ 0.4
HDDC3-201ENST00000330334 hCG_1818297A0A087WSY0 165 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 KIR2DS5A0A0G2JLQ3 304 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 A0A0G2JNG1 304 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 HACD1B0YJ81 288 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 KIR2DS3K7RE56 304 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 CHUKO15111 745 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 SLC25A14O95258 325 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-201ENST00000330334 EML2O95834 649 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 LIPCP11150 499 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PECAM1P16284 738 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-201ENST00000330334 ITIH1P19827 911 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 CD68P34810 354 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-201ENST00000330334 CYLC1P35663 651 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-201ENST00000330334 HMGCLP35914 325 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 ETV5P41161 510 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 COPS2P61201 443 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 CFHR1Q03591 330 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 ADCY2Q08462 1091 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 C19orf57Q0VDD7 668 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 KIR2DS5Q14953 304 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PPP2R5EQ16537 467 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PCSK7Q16549 785 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 ZNF569Q5MCW4 686 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 KAZNQ674X7 775 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 TMEM71Q6P5X7 295 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 WDR74Q6RFH5 385 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-201ENST00000330334 DTX1Q86Y01 620 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 USP7Q93009 1102 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 GLYATL1Q969I3 302 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 RBM41Q96IZ5 413 aaKnown RBP17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PLEKHG4BQ96PX9 1271 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 FCRL5Q96RD9 977 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 SLC38A3Q99624 504 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 TRHDEQ9UKU6 1024 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 EFR3BQ9Y2G0 817 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PRKAB1Q9Y478 270 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PCDHGA3Q9Y5H0 932 aa17.55■□□□□ 0.4
HDDC3-201ENST00000330334 PRAMEF33A0A0G2JMD5 474 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 C9orf172C9J069 976 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 EFSO43281 561 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 VEGFDO43915 354 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 PRAMEF10O60809 474 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 PMPCBO75439 489 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 PIRTP0C851 137 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 THRAP10827 490 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 F3P13726 295 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 ZNF8P17098 575 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-201ENST00000330334 BPIP17213 487 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 FECHP22830 423 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 XRCC4Q13426 336 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 NKAIN2Q5VXU1 208 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 ZDHHC20Q5W0Z9 365 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 KDELC1Q6UW63 502 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 B4GALNT4Q76KP1 1039 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 ADGRG6Q86SQ4 1221 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 SLC9B2Q86UD5 537 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 TMTC1Q8IUR5 882 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 AGBL5Q8NDL9 886 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 OR10G6Q8NH81 332 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 TTC9Q92623 222 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 MRFAP1L1Q96HT8 127 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 CCDC74BQ96LY2 380 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 VPS35Q96QK1 796 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 TAAR9Q96RI9 348 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-201ENST00000330334 EPB41L1Q9H4G0 881 aa17.54■□□□□ 0.4
HDDC3-201ENST00000330334 STN1Q9H668 368 aaKnown RBP17.54■□□□□ 0.4
HDDC3-201ENST00000330334 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDDC3-201ENST00000330334 EPN1Q9Y6I3 576 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-201ENST00000330334 SCN8AQ9UQD0 1980 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 ACP5P13686 325 aa17.53■□□□□ 0.4
HDDC3-201ENST00000330334 CSF2RBP32927 897 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms