RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 PUS10Q3MIT2 529 aaKnown RBP22.49■■□□□ 1.19
CDX1-201ENST00000231656 LSMEM2Q8N112 164 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 RAB3IPQ96QF0 476 aaPredicted RBP22.49■■□□□ 1.19
CDX1-201ENST00000231656 HEPHQ9BQS7 1158 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 CCDC106Q9BWC9 280 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 SUV39H2Q9H5I1 410 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 POPDC3Q9HBV1 291 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 WASF2Q9Y6W5 498 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 PIAS3Q9Y6X2 628 aa22.49■■□□□ 1.19
CDX1-201ENST00000231656 NARSO43776 548 aaKnown RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 SLC4A1P02730 911 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 RBP1P09455 135 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 MPSTP25325 297 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 PMLP29590 882 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 CCR10P46092 362 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 EPHB1P54762 984 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 RPL26P61254 145 aaKnown RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 HNRNPA1L2Q32P51 320 aaKnown RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 ARL13AQ5H913 290 aaPredicted RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 EGFLAMQ63HQ2 1017 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 KLC3Q6P597 504 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 SERPINA13PQ6UXR4 307 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 RALGPS2Q86X27 583 aaPredicted RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 GRIN3AQ8TCU5 1115 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 LPGAT1Q92604 370 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 EZH1Q92800 747 aaPredicted RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 ECHDC3Q96DC8 303 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 SGF29Q96ES7 293 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 ZNF641Q96N77 438 aaPredicted RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 TCF12Q99081 682 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 TBC1D10AQ9BXI6 508 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 ILKAPQ9H0C8 392 aaPredicted RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 ZDHHC4Q9NPG8 344 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 RPL26L1Q9UNX3 145 aaKnown RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 TRIOO75962 3097 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 UGT2B4P06133 528 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 TNFRSF4P43489 277 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 ALDH18A1P54886 795 aaKnown RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 VWA5B1Q5TIE3 1220 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 EPGNQ6UW88 154 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 ZSWIM9Q86XI8 627 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 C8orf33Q9H7E9 229 aaPredicted RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 PRDM6Q9NQX0 595 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 FKBPLQ9UIM3 349 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 SORCS3Q9UPU3 1222 aa22.48■■□□□ 1.19
CDX1-201ENST00000231656 APOBEC2Q9Y235 224 aaKnown RBP22.48■■□□□ 1.19
CDX1-201ENST00000231656 SCN8AQ9UQD0 1980 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 EDDM13A0A1B0GTR0 161 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 H7C0S8 307 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 K7EQS6 105 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 NPHS1O60500 1241 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 CTSLP07711 333 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 IL12RB1P42701 662 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 RIPK1Q13546 671 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 TBCCQ15814 346 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 GDPD4Q6W3E5 623 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 PAF1Q8N7H5 531 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 ACOX2Q99424 681 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 COG4Q9H9E3 785 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 IL36AQ9UHA7 158 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 STK38LQ9Y2H1 464 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 ZNF711Q9Y462 761 aa22.47■■□□□ 1.19
CDX1-201ENST00000231656 NEMP2A6NFY4 417 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 LOC730098B7Z3J9 87 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 STX7O15400 261 aaKnown RBP22.46■■□□□ 1.19
CDX1-201ENST00000231656 LEFTY1O75610 366 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 ESRRAP11474 423 aaPredicted RBP22.46■■□□□ 1.19
CDX1-201ENST00000231656 HNRNPLP14866 589 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDX1-201ENST00000231656 MC4RP32245 332 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 HK2P52789 917 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 PRKAA1Q13131 559 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 PEX6Q13608 980 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 ARSIQ5FYB1 569 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 C9orf64Q5T6V5 341 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 IER5LQ5T953 404 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 MAFAQ8NHW3 353 aaPredicted RBP22.46■■□□□ 1.19
CDX1-201ENST00000231656 MIPEPQ99797 713 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 MAGEE1Q9HCI5 957 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 CACNA2D2Q9NY47 1150 aa22.46■■□□□ 1.19
CDX1-201ENST00000231656 ZNF106Q9H2Y7 1883 aaKnown RBP22.46■■□□□ 1.19
CDX1-201ENST00000231656 A8MT66 165 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 MATN2O00339 956 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 CTPS1P17812 591 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 TFEBP19484 476 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 CDKN1CP49918 316 aaPredicted RBP22.45■■□□□ 1.19
CDX1-201ENST00000231656 TDGQ13569 410 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 UBAP2LQ14157 1087 aaKnown RBP22.45■■□□□ 1.19
CDX1-201ENST00000231656 PON2Q15165 354 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 PIWIL4Q7Z3Z4 852 aaKnown RBP22.45■■□□□ 1.19
CDX1-201ENST00000231656 ISCA2Q86U28 154 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 PIANPQ8IYJ0 282 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 MAPK15Q8TD08 544 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 CCDC126Q96EE4 140 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 LRIG1Q96JA1 1093 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 KLHL32Q96NJ5 620 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 BTBD10Q9BSF8 475 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 BPIFA1Q9NP55 256 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 IL17CQ9P0M4 197 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 MED16Q9Y2X0 877 aa22.45■■□□□ 1.19
CDX1-201ENST00000231656 A0A0J9YYE9 177 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms