RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TRMT6Q9UJA5 497 aaKnown RBP18.01■□□□□ 0.47
VIM-201ENST00000224237 GNPTGQ9UJJ9 305 aa18.01■□□□□ 0.47
VIM-201ENST00000224237 NUMBLQ9Y6R0 609 aa18.01■□□□□ 0.47
VIM-201ENST00000224237 NIPSNAP2O75323 286 aa18■□□□□ 0.47
VIM-201ENST00000224237 LYPLA1O75608 230 aaPredicted RBP18■□□□□ 0.47
VIM-201ENST00000224237 DCTN3O75935 186 aa18■□□□□ 0.47
VIM-201ENST00000224237 APODP05090 189 aa18■□□□□ 0.47
VIM-201ENST00000224237 POU3F3P20264 500 aaPredicted RBP18■□□□□ 0.47
VIM-201ENST00000224237 SOX9P48436 509 aa18■□□□□ 0.47
VIM-201ENST00000224237 ARFIP2P53365 341 aa18■□□□□ 0.47
VIM-201ENST00000224237 SETMARQ53H47 684 aaPredicted RBP18■□□□□ 0.47
VIM-201ENST00000224237 PAQR3Q6TCH7 311 aa18■□□□□ 0.47
VIM-201ENST00000224237 DPPA4Q7L190 304 aa18■□□□□ 0.47
VIM-201ENST00000224237 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
VIM-201ENST00000224237 WDR75Q8IWA0 830 aaKnown RBP18■□□□□ 0.47
VIM-201ENST00000224237 NXPE1Q8N323 547 aa18■□□□□ 0.47
VIM-201ENST00000224237 NKAPQ8N5F7 415 aaKnown RBP18■□□□□ 0.47
VIM-201ENST00000224237 GBP7Q8N8V2 638 aaPredicted RBP18■□□□□ 0.47
VIM-201ENST00000224237 SUSD6Q92537 303 aa18■□□□□ 0.47
VIM-201ENST00000224237 SORT1Q99523 831 aa18■□□□□ 0.47
VIM-201ENST00000224237 GATA5Q9BWX5 397 aaPredicted RBP18■□□□□ 0.47
VIM-201ENST00000224237 DERL2Q9GZP9 239 aa18■□□□□ 0.47
VIM-201ENST00000224237 ALG9Q9H6U8 611 aa18■□□□□ 0.47
VIM-201ENST00000224237 KCNK13Q9HB14 408 aa18■□□□□ 0.47
VIM-201ENST00000224237 THAP10Q9P2Z0 257 aaPredicted RBP18■□□□□ 0.47
VIM-201ENST00000224237 TCF20Q9UGU0 1960 aaKnown RBP17.99■□□□□ 0.47
VIM-201ENST00000224237 F8W8V4 182 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 H3BMM5 538 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 ZBTB14O43829 449 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 UGT1A6P19224 532 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 CHRM3P20309 590 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 UGT1A1P22309 533 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 UGT1A4P22310 534 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 ITGB7P26010 798 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 UGT1A3P35503 534 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 UGT1A5P35504 534 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 IL12RB1P42701 662 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 RGS19P49795 217 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 DCDC1P59894 354 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 DNAJB13P59910 316 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 ATP6V0D1P61421 351 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 CCDC15Q0P6D6 951 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 POM121L1PQ3SYA9 428 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 C10orf67Q8IYJ2 551 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 RHEBL1Q8TAI7 183 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 ULK4Q96C45 1275 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 PPP1R16AQ96I34 528 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 TMEM120AQ9BXJ8 343 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 RAD18Q9NS91 495 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 KCNK4Q9NYG8 393 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 SARDHQ9UL12 918 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 PPM1HQ9ULR3 514 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 DNAJC16Q9Y2G8 782 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 HSPA4LO95757 839 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 KITP10721 976 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 CA5AP35218 305 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 MMP12P39900 470 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 SETDB1Q15047 1291 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 PTRHD1Q6GMV3 140 aaKnown RBP17.99■□□□□ 0.47
VIM-201ENST00000224237 SLC22A9Q8IVM8 553 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 TXNDC5Q8NBS9 432 aaKnown RBP17.99■□□□□ 0.47
VIM-201ENST00000224237 PIP4K2CQ8TBX8 421 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 CD200R1Q8TD46 325 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 DTX3LQ8TDB6 740 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 PTERQ96BW5 349 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 ERLEC1Q96DZ1 483 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 SGF29Q96ES7 293 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 DRC3Q9H069 523 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 CDH19Q9H159 772 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 TFB2MQ9H5Q4 396 aaKnown RBP17.99■□□□□ 0.47
VIM-201ENST00000224237 NCKIPSDQ9NZQ3 722 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 NFKBIL1Q9UBC1 381 aaPredicted RBP17.99■□□□□ 0.47
VIM-201ENST00000224237 MARCOQ9UEW3 520 aaPredicted RBP17.99■□□□□ 0.47
VIM-201ENST00000224237 SUN2Q9UH99 717 aa17.99■□□□□ 0.47
VIM-201ENST00000224237 RGSL1A5PLK6 1076 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 ANKRD65E5RJM6 399 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 IPO13O94829 963 aaKnown RBP17.98■□□□□ 0.47
VIM-201ENST00000224237 ARRB2P32121 409 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 NSG1P42857 185 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 NAGLUP54802 743 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 RALGDSQ12967 914 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 HTR4Q13639 388 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 RCN2Q14257 317 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 E2F5Q15329 346 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 ATP13A5Q4VNC0 1218 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 PIWIL4Q7Z3Z4 852 aaKnown RBP17.98■□□□□ 0.47
VIM-201ENST00000224237 DSG4Q86SJ6 1040 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 FITM2Q8N6M3 262 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 SIDT2Q8NBJ9 832 aaKnown RBP17.98■□□□□ 0.47
VIM-201ENST00000224237 PPM1EQ8WY54 764 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 LRCH3Q96II8 777 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 LRRC37BQ96QE4 947 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 BOCQ9BWV1 1114 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 ZDHHC3Q9NYG2 299 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 CD207Q9UJ71 328 aa17.98■□□□□ 0.47
VIM-201ENST00000224237 A8MT66 165 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 ANHXE9PGG2 379 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 PSMD11O00231 422 aa17.97■□□□□ 0.47
VIM-201ENST00000224237 SNUPNO95149 360 aaKnown RBP17.97■□□□□ 0.47
VIM-201ENST00000224237 SERPINB5P36952 375 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms