RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CEP290O15078 2479 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 TCRBV3S1A0A5B6 114 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 BBIP1A8MTZ0 92 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ZMPSTE24O75844 475 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 FGF1P05230 155 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 OXCT1P55809 520 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 PSME3P61289 254 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 PPM1LQ5SGD2 360 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ZC3HC1Q86WB0 502 aaKnown RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 CIR1Q86X95 450 aaPredicted RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 PELI3Q8N2H9 469 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 PSKH2Q96QS6 385 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 MRPL57Q9BQC6 102 aaKnown RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 LRRC3Q9BY71 257 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 RNF38Q9H0F5 515 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 CERS4Q9HA82 394 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ACOT9Q9Y305 439 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 A0A087WXM4 84 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 OLFM2O95897 454 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 KLKB1P03952 638 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 SERPINF2P08697 491 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 HOXD9P28356 352 aaPredicted RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 INHBCP55103 352 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 DSC2Q02487 901 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 TSTD2Q5T7W7 516 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 LRRC8EQ6NSJ5 796 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 ESRP1Q6NXG1 681 aaKnown RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 ELMOD1Q8N336 334 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 PGBD5Q8N414 524 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.24■□□□□ 0.51
SDC2-202ENST00000518385 MFSD2AQ8NA29 543 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 C2CD4AQ8NCU7 369 aaPredicted RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 ZUFSPQ96AP4 578 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 ROPN1LQ96C74 230 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 MYEOVQ96EZ4 313 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 RMND5BQ96G75 393 aaPredicted RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 SEMA3CQ99985 751 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 MGME1Q9BQP7 344 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 TRMOQ9BU70 441 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 SLC25A23Q9BV35 468 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 LMAN2LQ9H0V9 348 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 MRPL46Q9H2W6 279 aaKnown RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 MUC13Q9H3R2 512 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 CLK4Q9HAZ1 481 aaKnown RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 ARMC1Q9NVT9 282 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 ZNF358Q9NW07 568 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 UBA2Q9UBT2 640 aaPredicted RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 ZNF510Q9Y2H8 683 aa18.24■□□□□ 0.51
SDC2-202ENST00000518385 ARIH1Q9Y4X5 557 aaPredicted RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 COPG1Q9Y678 874 aaKnown RBP18.24■□□□□ 0.51
SDC2-202ENST00000518385 A0A0J9YVX5 310 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 MROH6A6NGR9 719 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 SLC7A4O43246 635 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 RHOCP08134 193 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 MBL2P11226 248 aaPredicted RBP18.23■□□□□ 0.51
SDC2-202ENST00000518385 ATP5F1P24539 256 aaPredicted RBP18.23■□□□□ 0.51
SDC2-202ENST00000518385 MS4A2Q01362 244 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 SPIDRQ14159 915 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 PCSK7Q16549 785 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 PPP2R2DQ66LE6 453 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 IL31Q6EBC2 164 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 KRT80Q6KB66 452 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 PPP4R4Q6NUP7 873 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 TMC8Q8IU68 726 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 CFAP52Q8N1V2 620 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 TMEM151AQ8N4L1 468 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 KDM1BQ8NB78 822 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 SCYL1Q96KG9 808 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 YTHDF1Q9BYJ9 559 aaKnown RBP18.23■□□□□ 0.51
SDC2-202ENST00000518385 OCEL1Q9H607 264 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 WDR55Q9H6Y2 383 aaPredicted RBP18.23■□□□□ 0.51
SDC2-202ENST00000518385 TRPC7Q9HCX4 862 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 SPAG4Q9NPE6 437 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 GKN1Q9NS71 199 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 DNAAF2Q9NVR5 837 aaKnown RBP18.23■□□□□ 0.51
SDC2-202ENST00000518385 APPL1Q9UKG1 709 aa18.23■□□□□ 0.51
SDC2-202ENST00000518385 ANAPC1Q9H1A4 1944 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 TYW5A2RUC4 315 aaKnown RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 TRIM24O15164 1050 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 HNRNPRO43390 633 aaKnown RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 PYGLP06737 847 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 BMP2P12643 396 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 ATP6V1B1P15313 513 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 EPHA3P29320 983 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 HOXA9P31269 272 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 SLC5A2P31639 672 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 RAB10P61026 200 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 MAXP61244 160 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 RPS24P62847 133 aaKnown RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 USP10Q14694 798 aaKnown RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 C6orf52Q5T4I8 152 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 INTS11Q5TA45 600 aaKnown RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 NEPROQ6NW34 567 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 IYDQ6PHW0 289 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 GAREM2Q75VX8 874 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 HS6ST3Q8IZP7 471 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 ZNF420Q8TAQ5 688 aaPredicted RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 SLC28A3Q9HAS3 691 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 LMCD1Q9NZU5 365 aa18.22■□□□□ 0.51
SDC2-202ENST00000518385 ZDHHC2Q9UIJ5 367 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms