RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 TRIML1Q8N9V2 468 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 AVL9Q8NBF6 648 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 SCCPDHQ8NBX0 429 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 MNS1Q8NEH6 495 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 AGBL3Q8NEM8 1001 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 BEST2Q8NFU1 509 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 GOT1L1Q8NHS2 421 aaPredicted RBP3.19□□□□□ -1.9
RBM28-207ENST00000488249 NFKBIDQ8NI38 313 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 BRSK1Q8TDC3 778 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 RRP36Q96EU6 259 aaKnown RBP3.19□□□□□ -1.9
RBM28-207ENST00000488249 SCMH1Q96GD3 660 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 GSDMAQ96QA5 445 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 AGXT2Q9BYV1 514 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 SIL1Q9H173 461 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 PLEKHA4Q9H4M7 779 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 RPAP3Q9H6T3 665 aaPredicted RBP3.19□□□□□ -1.9
RBM28-207ENST00000488249 BPIFA1Q9NP55 256 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 CPSF2Q9P2I0 782 aaKnown RBP3.19□□□□□ -1.9
RBM28-207ENST00000488249 CGNQ9P2M7 1197 aaKnown RBP3.19□□□□□ -1.9
RBM28-207ENST00000488249 SLC9A2Q9UBY0 812 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 TBC1D29Q9UFV1 150 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 CTNNA3Q9UI47 895 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 SLCO3A1Q9UIG8 710 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 SH3BGRL2Q9UJC5 107 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 PRDM4Q9UKN5 801 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 SARDHQ9UL12 918 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 CDC14AQ9UNH5 594 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 ITM2BQ9Y287 266 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 PIK3R4Q99570 1358 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 DOCK7Q96N67 2140 aa3.19□□□□□ -1.9
RBM28-207ENST00000488249 SYNJ2BP-COX16A0A087WUM0 186 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 A0A0B4J203 849 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 C2orf81A6NN90 581 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 AKR1B15C9JRZ8 316 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 SEC14L5O43304 696 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 TNFSF14O43557 240 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 CLTBP09497 229 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 STIP1P31948 543 aaKnown RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 STX2P32856 288 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 HADHAP40939 763 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 HNF4AP41235 474 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 GNAQP50148 359 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ECT2LQ008S8 904 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 IL1RL1Q01638 556 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 UBXN1Q04323 297 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 CALD1Q05682 793 aaKnown RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 COASYQ13057 564 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 SF3B4Q15427 424 aaKnown RBP eCLIP3.18□□□□□ -1.91e-12■■■■■ 57
RBM28-207ENST00000488249 TAF7Q15545 349 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 AMZ1Q400G9 498 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ANKDD1AQ495B1 522 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 KRTCAP3Q53RY4 240 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 PPP6R3Q5H9R7 873 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 TAF3Q5VWG9 929 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ACAD10Q6JQN1 1059 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 SPSB3Q6PJ21 355 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 FBXO46Q6PJ61 603 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 FIP1L1Q6UN15 594 aaKnown RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 KDELC1Q6UW63 502 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 LCTLQ6UWM7 567 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 B3GNT6Q6ZMB0 384 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 RAPH1Q70E73 1250 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 MTSS1LQ765P7 747 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 LINGO2Q7L985 606 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 KRT74Q7RTS7 529 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 SLC46A3Q7Z3Q1 461 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ARMC8Q8IUR7 673 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 SLC35F3Q8IY50 421 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 TBC1D21Q8IYX1 336 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 ZNF540Q8NDQ6 660 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 CREB3L4Q8TEY5 395 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ZNF75CPQ92670 426 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 ARHGEF2Q92974 986 aaKnown RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 ZUFSPQ96AP4 578 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 MTBPQ96DY7 904 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ADGRG7Q96K78 797 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 DUX5Q96PT3 197 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 OR1F2PQ96R84 312 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 SLC25A18Q9H1K4 315 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 GAREM1Q9H706 876 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 DDX31Q9H8H2 851 aaKnown RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 JMJD4Q9H9V9 463 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 MKKSQ9NPJ1 570 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 HAUS2Q9NVX0 235 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 HPF1Q9NWY4 346 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 C6orf203Q9P0P8 240 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 LAMP5Q9UJQ1 280 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 DUSP12Q9UNI6 340 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 NAALADL1Q9UQQ1 740 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ZNF711Q9Y462 761 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ZFP37Q9Y6Q3 630 aaPredicted RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 UNC13AQ9UPW8 1703 aa3.18□□□□□ -1.9
RBM28-207ENST00000488249 ATXN2Q99700 1313 aaKnown RBP3.18□□□□□ -1.9
RBM28-207ENST00000488249 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 PLSCR5A0PG75 271 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 DENND3A2RUS2 1198 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 CCDC69A6NI79 296 aa3.17□□□□□ -1.9
RBM28-207ENST00000488249 PI4K2BG5E9Z4 385 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms