RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 MCCC1Q96RQ3 725 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-205ENST00000473879 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 C19orf43Q9BQ61 176 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 GPR63Q9BZJ6 419 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 PLAC1Q9HBJ0 212 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 PPANQ9NQ55 473 aaKnown RBP13.23□□□□□ -0.29
BRAT1-205ENST00000473879 TREX1Q9NSU2 369 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 SLC24A2Q9UI40 661 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 SPO11Q9Y5K1 396 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 SNX11Q9Y5W9 270 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 IKBKGQ9Y6K9 419 aa13.23□□□□□ -0.29
BRAT1-205ENST00000473879 ASCC3Q8N3C0 2202 aaKnown RBP13.23□□□□□ -0.29
BRAT1-205ENST00000473879 SPTBN2O15020 2390 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 BPTFQ12830 3046 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 A0A1W2PR77 199 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 FAM159BA6NKW6 160 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 RASGRF2O14827 1237 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 GIPC1O14908 333 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 AREL1O15033 823 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 AP1G1O43747 822 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 PRKCGP05129 697 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ADRB3P13945 408 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 LPOP22079 712 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 KCNA4P22459 653 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 CD38P28907 300 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 HADHAP40939 763 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ABL2P42684 1182 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 CTSKP43235 329 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF140P52738 457 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 C21orf59P57076 290 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 PRAMEP78395 509 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ACVR1Q04771 509 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 UGP2Q16851 508 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 KRT71Q3SY84 523 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 SETMARQ53H47 684 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 HSP90B2PQ58FF3 399 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 N4BP2L1Q5TBK1 243 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ERAP2Q6P179 960 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 CES3Q6UWW8 571 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 PARS2Q7L3T8 475 aaKnown RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 KCNMB4Q86W47 210 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ZSWIM9Q86XI8 627 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 DEFB124Q8NES8 71 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 SCRN2Q96FV2 425 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 FCRL3Q96P31 734 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 TRIM56Q9BRZ2 755 aaKnown RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 IL21RQ9HBE5 538 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 AASDHPPTQ9NRN7 309 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 TM7SF3Q9NS93 570 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 C20orf96Q9NUD7 363 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 NLE1Q9NVX2 485 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-205ENST00000473879 NSMCE4AQ9NXX6 385 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ZFATQ9P243 1243 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 PKP3Q9Y446 797 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
BRAT1-205ENST00000473879 C1orf232A0A0U1RR37 186 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 CCDC78A2IDD5 438 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 C16orf96A6NNT2 1141 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 WNT9AO14904 365 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 STX7O15400 261 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 DFNA5O60443 496 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 CDH16O75309 829 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 SLC4A1P02730 911 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 WNT1P04628 370 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ALPIP09923 528 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF30P17039 623 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 MAT2AP31153 395 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 VIPR1P32241 457 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 HNF1BP35680 557 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 MSH2P43246 934 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ELP6Q0PNE2 266 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 THOC5Q13769 683 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ARHGEF7Q14155 803 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 RASA2Q15283 850 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 CNGA3Q16281 694 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ZNF423Q2M1K9 1284 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 KBTBD12Q3ZCT8 623 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 TMEM259Q4ZIN3 620 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 ESRP1Q6NXG1 681 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 FBXL19Q6PCT2 694 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 LAYNQ6UX15 382 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 DBX2Q6ZNG2 339 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 MARK2Q7KZI7 788 aaKnown RBP13.21□□□□□ -0.29
BRAT1-205ENST00000473879 LYSMD3Q7Z3D4 306 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 IQCHQ86VS3 1027 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 HORMAD1Q86X24 394 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 LRRC6Q86X45 466 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 TDRPQ86YL5 185 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.29
BRAT1-205ENST00000473879 MFSD2AQ8NA29 543 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms