RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 INTUQ9ULD6 942 aa13.22□□□□□ -0.29
EDEM1-202ENST00000434243 OAS3Q9Y6K5 1087 aaKnown RBP13.22□□□□□ -0.29
EDEM1-202ENST00000434243 PRAMEF33A0A0G2JMD5 474 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 RGSL1A5PLK6 1076 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 FADS2P1A8MWK0 482 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 K7ENP7 123 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 PRAMEF10O60809 474 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 ACP5P13686 325 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 CD1CP29017 333 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 ETV5P41161 510 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 GPR3P46089 330 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 CDK18Q07002 472 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 TFDP2Q14188 446 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 C16orf72Q14CZ0 275 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 TGIF1Q15583 401 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 HENMT1Q5T8I9 393 aaKnown RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 TMEM164Q5U3C3 297 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 INO80CQ6PI98 192 aaPredicted RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 BZW1Q7L1Q6 419 aaKnown RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 ZNF438Q7Z4V0 828 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 LSM14AQ8ND56 463 aaKnown RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 SPATA22Q8NHS9 363 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 IMP4Q96G21 291 aaKnown RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 CCDC74BQ96LY2 380 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 BRD8Q9H0E9 1235 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 SLC25A51Q9H1U9 297 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 VPS18Q9P253 973 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 SAE1Q9UBE0 346 aaPredicted RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 CNOT6Q9ULM6 557 aaKnown RBP13.21□□□□□ -0.29
EDEM1-202ENST00000434243 KCNK6Q9Y257 313 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 PCDHB11Q9Y5F2 797 aa13.21□□□□□ -0.29
EDEM1-202ENST00000434243 ANKRD11Q6UB99 2663 aaPredicted RBP13.21□□□□□ -0.3
EDEM1-202ENST00000434243 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.3
EDEM1-202ENST00000434243 RP1P56715 2156 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 LRP4O75096 1905 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 IGHV1OR21-1A0A087WYE8 117 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 IGHV5-10-1A0A0J9YXX1 117 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 NVLO15381 856 aaKnown RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 GRID2O43424 1007 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 CST8O60676 142 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 DNAJC6O75061 913 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 PMPCBO75439 489 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 SLC25A14O95258 325 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 MT-CYBP00156 380 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 CCL4P13236 92 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 NFATC2Q13469 925 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 NR1D2Q14995 579 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 CLPPQ16740 277 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 TEX44Q53QW1 395 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 ZNF569Q5MCW4 686 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 KIAA1614Q5VZ46 1190 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 ZNF574Q6ZN55 896 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 ZFAND4Q86XD8 727 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 CCDC50Q8IVM0 306 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 SLC37A2Q8TED4 501 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 TFB1MQ8WVM0 346 aaKnown RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 OR2AG1Q9H205 316 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 STN1Q9H668 368 aaKnown RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 RMI1Q9H9A7 625 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 MAGEE1Q9HCI5 957 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 FOXJ2Q9P0K8 574 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 ZNF711Q9Y462 761 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 PCYT1BQ9Y5K3 369 aaPredicted RBP13.2□□□□□ -0.3
EDEM1-202ENST00000434243 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
EDEM1-202ENST00000434243 LAMA5O15230 3695 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 COL27A1Q8IZC6 1860 aaPredicted RBP13.19□□□□□ -0.3
EDEM1-202ENST00000434243 F5H423 210 aaPredicted RBP13.19□□□□□ -0.3
EDEM1-202ENST00000434243 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
EDEM1-202ENST00000434243 EML2O95834 649 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 LIPCP11150 499 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 PTPN3P26045 913 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 CSTF2P33240 577 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■■■■ 27.4
EDEM1-202ENST00000434243 CDKN2BP42772 138 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 MAPK9P45984 424 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 NR2C2P49116 596 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 LIMK2P53671 638 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 GPLD1P80108 840 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 HHEXQ03014 270 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 CFHR1Q03591 330 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
EDEM1-202ENST00000434243 SPA17Q15506 151 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 SNAP47Q5SQN1 464 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 MANEAQ5SRI9 462 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 SPOCD1Q6ZMY3 1216 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 TMC3Q7Z5M5 1100 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 SLC9B2Q86UD5 537 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 ZC3H18Q86VM9 953 aaKnown RBP13.19□□□□□ -0.3
EDEM1-202ENST00000434243 PHYKPLQ8IUZ5 450 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 SFRP1Q8N474 314 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 GPR26Q8NDV2 337 aa13.19□□□□□ -0.3
EDEM1-202ENST00000434243 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms