RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 OR51F1A6NGY5 319 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 SRP72O76094 671 aaKnown RBP30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 PRSS56P0CW18 603 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 PSMA3P25788 255 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 TEAD1P28347 426 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 MC4RP32245 332 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 CTSKP43235 329 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 NFATC4Q14934 902 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 KCTD16Q68DU8 428 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 NLRP9Q7RTR0 991 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 PDIK1LQ8N165 341 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 HDAC10Q969S8 669 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 HIC2Q96JB3 615 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 FRMD8Q9BZ67 464 aaPredicted RBP30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 PHPT1Q9NRX4 125 aaPredicted RBP30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 TREX1Q9NSU2 369 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 SAMD15Q9P1V8 674 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 PNMA8BQ9ULN7 279 aaPredicted RBP30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 ZNF292O60281 2723 aa30.37■■■□□ 2.45
CSNK1E-206ENST00000413574 SPTY2D1-AS1A0A0U1RR47 76 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 LNP1A1A4G5 178 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 CACNB4O00305 520 aaPredicted RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ARHGAP33O14559 1287 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 NDC80O14777 642 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ENGP17813 658 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 FZD2Q14332 565 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 CSRP2Q16527 193 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ZNF542PQ5EBM4 170 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ZNF648Q5T619 568 aaPredicted RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 IGDCC3Q8IVU1 814 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ZNF398Q8TD17 642 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 C19orf43Q9BQ61 176 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 MRM3Q9HC36 420 aaKnown RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 RXFP3Q9NSD7 469 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 APPL1Q9UKG1 709 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 RIMKLBQ9ULI2 386 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 OAS3Q9Y6K5 1087 aaKnown RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 CCDC162PA2VCL2 907 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 MAGEC1O60732 1142 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 PYGLP06737 847 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 MYCLP1P12525 358 aaPredicted RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ARL4CP56559 192 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ACVR1Q04771 509 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 TEX35Q5T0J7 233 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ENPP7Q6UWV6 458 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 PTCD2Q8WV60 388 aaKnown RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 COX14Q96I36 57 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 FCRL3Q96P31 734 aaPredicted RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 GTPBP2Q9BX10 602 aaKnown RBP30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 ASB8Q9H765 288 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 GDF3Q9NR23 364 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 TMEM98Q9Y2Y6 226 aa30.36■■■□□ 2.45
CSNK1E-206ENST00000413574 LRP4O75096 1905 aa30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 RIF1Q5UIP0 2472 aaKnown RBP30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 H7C0S8 307 aa30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 TOR1BO14657 336 aa30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 CDKN1CP49918 316 aaPredicted RBP30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 KIAA1024LP59773 190 aa30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 SMAD1Q15797 465 aaKnown RBP30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 DNAJC21Q5F1R6 531 aaKnown RBP30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 DOK6Q6PKX4 331 aa30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 GLYATL1Q969I3 302 aa30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 WDR83Q9BRX9 315 aaKnown RBP30.35■■■□□ 2.45
CSNK1E-206ENST00000413574 LRP3O75074 770 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 SLC25A14O95258 325 aaPredicted RBP30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 HOXC4P09017 264 aaPredicted RBP30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 POLD2P49005 469 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 HLA-BQ31612 363 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 PDPK2PQ6A1A2 396 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 MACC1Q6ZN28 852 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 DCP2Q8IU60 420 aaKnown RBP30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 PNPLA1Q8N8W4 532 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 DTX3LQ8TDB6 740 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 BTN2A2Q8WVV5 523 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 IFT81Q8WYA0 676 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 STAMBPL1Q96FJ0 436 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 IL21RQ9HBE5 538 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 MRPL40Q9NQ50 206 aaKnown RBP30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 KLF15Q9UIH9 416 aa30.34■■■□□ 2.45
CSNK1E-206ENST00000413574 GFRA3O60609 400 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 MTX2O75431 263 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 HTR1BP28222 390 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 ELK3P41970 407 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 PDIA2Q13087 525 aaKnown RBP30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 EIF2B5Q13144 721 aaKnown RBP30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 NFATC2Q13469 925 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 PTK2BQ14289 1009 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 FASTKD3Q14CZ7 662 aaKnown RBP30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 ZRANB3Q5FWF4 1079 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 OR6P1Q8NGX9 317 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 PEX13Q92968 403 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 TSACCQ96A04 125 aaPredicted RBP30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 ZNF669Q96BR6 464 aaPredicted RBP30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 WDR92Q96MX6 357 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 FAM114A2Q9NRY5 505 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 ZDHHC18Q9NUE0 388 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 CHMP2BQ9UQN3 213 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 SLC30A1Q9Y6M5 507 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 RPS6KL1Q9Y6S9 549 aa30.33■■■□□ 2.45
CSNK1E-206ENST00000413574 FAM237BA0A1B0GVD1 139 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms