RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NPC1O15118 1278 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 PFDN6O15212 129 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 PRNPP04156 253 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 APODP05090 189 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 DCNP07585 359 aaKnown RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 CTSLP07711 333 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 F7P08709 466 aaPredicted RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 CCND1P24385 295 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 FOXN2P32314 431 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 ABCG1P45844 678 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 XIAPP98170 497 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 PEX6Q13608 980 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 ELAVL3Q14576 367 aaKnown RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 USP10Q14694 798 aaKnown RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 PTPRRQ15256 657 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 AARS2Q5JTZ9 985 aaKnown RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 CNSTQ6PJW8 725 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 TXNDC11Q6PKC3 985 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 KYAT3Q6YP21 454 aaKnown RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 CDHR3Q6ZTQ4 885 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 CMC1Q7Z7K0 106 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 FBXL6Q8N531 539 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 TMIEQ8NEW7 156 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 THOC1Q96FV9 657 aaKnown RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 SHDQ96IW2 340 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 MAGEB18Q96M61 343 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 ZNF317Q96PQ6 595 aaPredicted RBP12.02□□□□□ -0.49
USF1-203ENST00000368021 VPS11Q9H270 941 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 APPL1Q9UKG1 709 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 WDR87Q6ZQQ6 2873 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 ZNF106Q9H2Y7 1883 aaKnown RBP12.01□□□□□ -0.49
USF1-203ENST00000368021 A0A096LPK6 155 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 KANSL1LA0AUZ9 987 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 GMNCA6NCL1 334 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 FAM170BA6NMN3 283 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 SPECC1L-ADORA2AF8WAN1 911 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 CLDN7O95471 211 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 SLC4A1P02730 911 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 C2P06681 752 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 CYP2A6P11509 494 aaPredicted RBP12.01□□□□□ -0.49
USF1-203ENST00000368021 COL6A2P12110 1019 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 STMN1P16949 149 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 ZNF30P17039 623 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 CRABP2P29373 138 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 PMLP29590 882 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 MC4RP32245 332 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 TTPAP49638 278 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 RAB10P61026 200 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 PDK4Q16654 411 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 ZNF789Q5FWF6 425 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 C9orf64Q5T6V5 341 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 ZDHHC20Q5W0Z9 365 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 CRTC1Q6UUV9 634 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 SERPINA13PQ6UXR4 307 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 ZNF852Q6ZMS4 543 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 RINLQ6ZS11 566 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 RGS9BPQ6ZS82 235 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 CLEC14AQ86T13 490 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 ACVR1CQ8NER5 493 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 GDAP1Q8TB36 358 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 FAM3CQ92520 227 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 FAM111AQ96PZ2 611 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 BPIFA1Q9NP55 256 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 BLOC1S6Q9UL45 172 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 ANKRD6Q9Y2G4 727 aa12.01□□□□□ -0.49
USF1-203ENST00000368021 A6NHS1 94 aa12□□□□□ -0.49
USF1-203ENST00000368021 UPK3BL1B0FP48 263 aa12□□□□□ -0.49
USF1-203ENST00000368021 UPK3BL2E5RIL1 263 aa12□□□□□ -0.49
USF1-203ENST00000368021 ZSCAN9O15535 394 aaPredicted RBP12□□□□□ -0.49
USF1-203ENST00000368021 HNRNPLP14866 589 aaKnown RBP eCLIP12□□□□□ -0.49
USF1-203ENST00000368021 CTHP32929 405 aa12□□□□□ -0.49
USF1-203ENST00000368021 TNFRSF4P43489 277 aa12□□□□□ -0.49
USF1-203ENST00000368021 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
USF1-203ENST00000368021 STARD6P59095 220 aa12□□□□□ -0.49
USF1-203ENST00000368021 PRKCQQ04759 706 aa12□□□□□ -0.49
USF1-203ENST00000368021 CACNG1Q06432 222 aa12□□□□□ -0.49
USF1-203ENST00000368021 ENPP2Q13822 863 aa12□□□□□ -0.49
USF1-203ENST00000368021 SEMA3AQ14563 771 aa12□□□□□ -0.49
USF1-203ENST00000368021 TAF1BQ53T94 588 aaPredicted RBP12□□□□□ -0.49
USF1-203ENST00000368021 LRRC66Q68CR7 880 aa12□□□□□ -0.49
USF1-203ENST00000368021 CERS6Q6ZMG9 384 aa12□□□□□ -0.49
USF1-203ENST00000368021 BMP8AQ7Z5Y6 402 aa12□□□□□ -0.49
USF1-203ENST00000368021 SFTPA1Q8IWL2 248 aa12□□□□□ -0.49
USF1-203ENST00000368021 ZNF366Q8N895 744 aa12□□□□□ -0.49
USF1-203ENST00000368021 OR8D1Q8WZ84 308 aa12□□□□□ -0.49
USF1-203ENST00000368021 TSPAN17Q96FV3 270 aa12□□□□□ -0.49
USF1-203ENST00000368021 TRAPPC9Q96Q05 1148 aa12□□□□□ -0.49
USF1-203ENST00000368021 OMDQ99983 421 aa12□□□□□ -0.49
USF1-203ENST00000368021 MTG2Q9H4K7 406 aa12□□□□□ -0.49
USF1-203ENST00000368021 CAB39LQ9H9S4 337 aa12□□□□□ -0.49
USF1-203ENST00000368021 SUN2Q9UH99 717 aa12□□□□□ -0.49
USF1-203ENST00000368021 CIDEBQ9UHD4 219 aa12□□□□□ -0.49
USF1-203ENST00000368021 TLK1Q9UKI8 766 aa12□□□□□ -0.49
USF1-203ENST00000368021 PPM1HQ9ULR3 514 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms