RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 COL9A1P20849 921 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 NTSR1P30989 418 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 DRD3P35462 400 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 MMP12P39900 470 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 LEPRP48357 1165 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 SERPINB9P50453 376 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 CSRP3P50461 194 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 PGGT1BP53609 377 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 CSE1LP55060 971 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 PSAPL1Q6NUJ1 521 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 CNSTQ6PJW8 725 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 TIFABQ6ZNK6 161 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 TXNDC5Q8NBS9 432 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ZNF398Q8TD17 642 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 KCNV2Q8TDN2 545 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 FAM3CQ92520 227 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ATXN7L3BQ96GX2 97 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 VPS39Q96JC1 886 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 MKRN2Q9H000 416 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 FBXO6Q9NRD1 293 aaPredicted RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 FAM50BQ9Y247 325 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 KLHL33A6NCF5 533 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 GOLGA8RI6L899 631 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 KRT37O76014 449 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 KRT38O76015 456 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 KLF8O95600 359 aaPredicted RBP14.62□□□□□ -0.07
CXCL12-201ENST00000343575 KRT4P19013 534 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 VIPR1P32241 457 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 MC4RP32245 332 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 HADHAP40939 763 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 STC1P52823 247 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 KIAA0408Q6ZU52 694 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 DPPA4Q7L190 304 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 SPNS2Q8IVW8 549 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 C4orf33Q8N1A6 199 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 AADATQ8N5Z0 425 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 CALML6Q8TD86 181 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 ISL2Q96A47 359 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 RMDN2Q96LZ7 410 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 LRRC37BQ96QE4 947 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 VCXQ9H320 206 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 RHOJQ9H4E5 214 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 SAR1AQ9NR31 198 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 SMG5Q9UPR3 1016 aaKnown RBP14.62□□□□□ -0.07
CXCL12-201ENST00000343575 PKP3Q9Y446 797 aa14.62□□□□□ -0.07
CXCL12-201ENST00000343575 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 GOLGA8CPA6NN73 597 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 PRPF4O43172 522 aaKnown RBP eCLIP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 TYROBPO43914 113 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 ADRB3P13945 408 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CNTFP26441 200 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 GMPRP36959 345 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 MAGEA12P43365 314 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 PSMD8P48556 350 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SLC18A2Q05940 514 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 TYSND1Q2T9J0 566 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 AFTPHQ6ULP2 937 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 HSD11B1LQ7Z5J1 315 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 GALNT7Q86SF2 657 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 NDUFAF2Q8N183 169 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 DCLK2Q8N568 766 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 GPR22Q99680 433 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 FAM96AQ9H5X1 160 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CATSPERZQ9NTU4 200 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 NSMCE4AQ9NXX6 385 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CPSF2Q9P2I0 782 aaKnown RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SERGEFQ9UGK8 458 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 FNDC3AQ9Y2H6 1198 aaKnown RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SNUPNO95149 360 aaKnown RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 C7P10643 843 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 PYGBP11216 843 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 ZNF30P17039 623 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SPRP35270 261 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 P2RY2P41231 377 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SPINT3P49223 89 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 MRPS21P82921 87 aaKnown RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CNTN1Q12860 1018 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 MLF2Q15773 248 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CST6Q15828 149 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 PIP5KL1Q5T9C9 394 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SLC30A9Q6PML9 568 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 FAM151BQ6UXP7 276 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 LIPIQ6XZB0 460 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 BANPQ8N9N5 519 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 ZFAND2BQ8WV99 257 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 PBXIP1Q96AQ6 731 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 MTBPQ96DY7 904 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 MSANTD3Q96H12 275 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 SLC6A17Q9H1V8 727 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 DCLRE1BQ9H816 532 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 CAB39LQ9H9S4 337 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 TXNDC16Q9P2K2 825 aa14.61□□□□□ -0.07
CXCL12-201ENST00000343575 VCANP13611 3396 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 LRRK1Q38SD2 2015 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 KRBA1A5PL33 1030 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 AGAP14A8MT82 685 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 A8MUI8 341 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 TPP1O14773 563 aa14.6□□□□□ -0.07
CXCL12-201ENST00000343575 MID1O15344 667 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms