RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CLGNO14967 610 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SMAD9O15198 467 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 OGG1O15527 345 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SMAD6O43541 496 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 MITFO75030 526 aaPredicted RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 HIST1H2ABP04908 130 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 ALPLP05186 524 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 NR2F1P10589 423 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SELLP14151 372 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 HIST1H2ADP20671 130 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 CDC25AP30304 524 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SSTR2P30874 369 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 RAD52P43351 418 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SLC15A1P46059 708 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 HTR6P50406 440 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 CLCNKAP51800 687 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 GPR143P51810 404 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 POLGP54098 1239 aaPredicted RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 NANOS2P60321 138 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SEC61A1P61619 476 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 MRPS5P82675 430 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 LRMPQ12912 555 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 STK4Q13043 487 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 ZSCAN23Q3MJ62 389 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 PDXDC1Q6P996 788 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 BRAT1Q6PJG6 821 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SLC36A4Q6YBV0 504 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 HIST3H2AQ7L7L0 130 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 ATG9AQ7Z3C6 839 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 MCEMP1Q8IX19 187 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 TEX11Q8IYF3 940 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 WASF1Q92558 559 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 APBB2Q92870 758 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 SCMH1Q96GD3 660 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 FIZ1Q96SL8 496 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 KXD1Q9BQD3 176 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 NTPCRQ9BSD7 190 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 MAK16Q9BXY0 300 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 PIGMQ9H3S5 423 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 EPB41L5Q9HCM4 733 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 NOL7Q9UMY1 257 aaKnown RBP4.42□□□□□ -1.7
CCDC54-201ENST00000261058 PCDHGB4Q9UN71 923 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 TMEM5Q9Y2B1 443 aa4.42□□□□□ -1.7
CCDC54-201ENST00000261058 INSIG1O15503 277 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 SPINT2O43291 252 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 ENTPD3O75355 529 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 EGFP01133 1207 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 UGT1A1P22309 533 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 BDKRB2P30411 391 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 THBS3P49746 956 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 PNLIPRP2P54317 469 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 LTBQ06643 244 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 PCLAFQ15004 111 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 PLCB4Q15147 1175 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 TOMM20Q15388 145 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 CTF1Q16619 201 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 CCDC96Q2M329 555 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 XKR9Q5GH70 373 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 TMEM198Q66K66 360 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 DUS1LQ6P1R4 473 aaKnown RBP4.41□□□□□ -1.7
CCDC54-201ENST00000261058 ENOSF1Q7L5Y1 443 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 GALNT5Q7Z7M9 940 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 FJX1Q86VR8 437 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 EPHX4Q8IUS5 362 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 RBMXL3Q8N7X1 1067 aaKnown RBP4.41□□□□□ -1.7
CCDC54-201ENST00000261058 IL17RCQ8NAC3 791 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 OR1J2Q8NGS2 313 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 OR8K5Q8NH50 307 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 ERP27Q96DN0 273 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 CALML4Q96GE6 196 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF479Q96JC4 524 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 DACH2Q96NX9 599 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 PAG1Q9NWQ8 432 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 TRMT1Q9NXH9 659 aaKnown RBP4.41□□□□□ -1.7
CCDC54-201ENST00000261058 CLIC5Q9NZA1 410 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 PADI3Q9ULW8 664 aa4.41□□□□□ -1.7
CCDC54-201ENST00000261058 R3HDM2Q9Y2K5 976 aaKnown RBP4.41□□□□□ -1.7
CCDC54-201ENST00000261058 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 FAM90A26D6RGX4 464 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 FCGR1AP12314 374 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 GCH1P30793 250 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 MMP14P50281 582 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 MFAP4P55083 255 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 PSMC6P62333 389 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 CXCL9Q07325 125 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 FOXM1Q08050 763 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 KIF5AQ12840 1032 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 ZNF155Q12901 538 aaPredicted RBP4.4□□□□□ -1.7
CCDC54-201ENST00000261058 HLFQ16534 295 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 DCST1Q5T197 706 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 NSUN5P2Q63ZY6 315 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 FAM122CQ6P4D5 195 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 PAPD4Q6PIY7 484 aaKnown RBP4.4□□□□□ -1.7
CCDC54-201ENST00000261058 ADGRA1Q86SQ6 560 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 SDCCAG8Q86SQ7 713 aaPredicted RBP4.4□□□□□ -1.7
CCDC54-201ENST00000261058 C17orf53Q8N3J3 647 aaPredicted RBP4.4□□□□□ -1.7
CCDC54-201ENST00000261058 POC5Q8NA72 575 aa4.4□□□□□ -1.7
CCDC54-201ENST00000261058 SLC38A9Q8NBW4 561 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms