RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TXNDC16Q9P2K2 825 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 MTO1Q9Y2Z2 717 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 TECTAO75443 2155 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 TTC28Q96AY4 2481 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 PLXND1Q9Y4D7 1925 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 RFPL1O75677 317 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 HAUS5O94927 633 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 PRAMEF1O95521 474 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 ELFN1P0C7U0 828 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 KRT15P19012 456 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 NDUFV2P19404 249 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 CCNFP41002 786 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 ABCG1P45844 678 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 SLC18A2Q05940 514 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 NFATC2Q13469 925 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 GAS6Q14393 721 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 CHRNA6Q15825 494 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 GPR33Q49SQ1 333 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 AARS2Q5JTZ9 985 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 MROH9Q5TGP6 573 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 CNSTQ6PJW8 725 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 Q6ZVL8 140 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 ZNF765Q7L2R6 523 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 SDCCAG8Q86SQ7 713 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 LDB1Q86U70 411 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 NRSN1Q8IZ57 195 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 SIX5Q8N196 739 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 DCLK2Q8N568 766 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 OTUD6BQ8N6M0 293 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 ACVR1CQ8NER5 493 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 LPGAT1Q92604 370 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 GPR22Q99680 433 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 OSBPL6Q9BZF3 934 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 FOXQ1Q9C009 403 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 SLC6A17Q9H1V8 727 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 TBC1D17Q9HA65 648 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 INTS10Q9NVR2 710 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 SLC30A1Q9Y6M5 507 aa14.67□□□□□ -0.06
SHKBP1-211ENST00000595945 COL6A3P12111 3177 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 A0A1W2PP55 124 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 TSPAN6O43657 245 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 PLRG1O43660 514 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 MT-ND3P03897 115 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 DNTTP04053 509 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ALDOAP04075 364 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CREB1P16220 341 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 GABRG2P18507 467 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ITGALP20701 1170 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ETV3P41162 512 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 POLD2P49005 469 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 TTPAP49638 278 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CLCN5P51795 746 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CCDC15Q0P6D6 951 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ZRANB3Q5FWF4 1079 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 HENMT1Q5T8I9 393 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 USP30Q70CQ3 517 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 SYT13Q7L8C5 426 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CACUL1Q86Y37 369 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 SRRM1Q8IYB3 904 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 GJD3Q8N144 294 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ZNF398Q8TD17 642 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CLDN23Q96B33 292 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 DTD2Q96FN9 168 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 SIPA1Q96FS4 1042 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 MRGPRX1Q96LB2 322 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 WRAP53Q9BUR4 548 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ABCG8Q9H221 673 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 FAM83DQ9H4H8 585 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 FAM96AQ9H5X1 160 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 ASB8Q9H765 288 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 SSU72Q9NP77 194 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 SMOXQ9NWM0 555 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 FBXL12Q9NXK8 326 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 MUTYHQ9UIF7 546 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 FZD4Q9ULV1 537 aa14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CORO1CQ9ULV4 474 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 FNDC3AQ9Y2H6 1198 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-211ENST00000595945 CACNA1IQ9P0X4 2223 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 TCRBV21S2A2A0A5A6 115 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 FAM170BA6NMN3 283 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 WNT9AO14904 365 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 GPR39O43194 453 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 MMP20O60882 483 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 ATG13O75143 517 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 RNASEH2AO75792 299 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 C6P13671 934 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 UGT1A6P19224 532 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 UGT1A1P22309 533 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 UGT1A4P22310 534 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 UGT1A3P35503 534 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 UGT1A5P35504 534 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 DGKEP52429 567 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 UBXN2BQ14CS0 331 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 ACOX1Q15067 660 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 AGERQ15109 404 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 DBN1Q16643 649 aa14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 TTC31Q49AM3 519 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 RBM20Q5T481 1227 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-211ENST00000595945 RNF187Q5TA31 235 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms