RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TEX15Q9BXT5 2789 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 PSMD11O00231 422 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 NUDT21O43809 227 aaKnown RBP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 CYP2A6P11509 494 aaPredicted RBP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 POLD2P49005 469 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 CDK3Q00526 305 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 GBE1Q04446 702 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 SLC10A2Q12908 348 aaPredicted RBP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 HADHQ16836 314 aaKnown RBP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 C14orf28Q4W4Y0 310 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 C4orf17Q53FE4 359 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 ALG1LQ6GMV1 187 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 PIM3Q86V86 326 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 KCTD6Q8NC69 237 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 GPBAR1Q8TDU6 330 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 NKD1Q969G9 470 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 FAF2Q96CS3 445 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 DPEP2Q9H4A9 486 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 CARS2Q9HA77 564 aaKnown RBP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 PHPT1Q9NRX4 125 aaPredicted RBP11.82□□□□□ -0.52
GABPB1-206ENST00000543881 CTTNBP2NLQ9P2B4 639 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 CD84Q9UIB8 345 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 ANAPC2Q9UJX6 822 aa11.82□□□□□ -0.52
GABPB1-206ENST00000543881 NBASA2RRP1 2371 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 ARHGEF17Q96PE2 2063 aaPredicted RBP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 PDE2AO00408 941 aaPredicted RBP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 MATN3O15232 486 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 CPNE6O95741 557 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 PRLP01236 227 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 FGF1P05230 155 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 CCNB1P14635 433 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 LIFP15018 202 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 AK4P27144 223 aaPredicted RBP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 TEAD1P28347 426 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 CCR10P46092 362 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 MAZP56270 477 aaKnown RBP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 B4GALNT1Q00973 533 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 PTSQ03393 145 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 DPTQ07507 201 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 ITKQ08881 620 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 NIPAL4Q0D2K0 466 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 SLC18A3Q16572 532 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 AMZ1Q400G9 498 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 FAM182AQ5T1J6 154 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 LRRC66Q68CR7 880 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 RAET1GQ6H3X3 334 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 USP45Q70EL2 814 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 C17orf82Q86X59 251 aaPredicted RBP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 FAM26EQ8N5C1 309 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 IL22RA1Q8N6P7 574 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 RCBTB1Q8NDN9 531 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 ARRDC2Q8TBH0 407 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 RAPGEF5Q92565 580 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 FATE1Q969F0 183 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 TSGA13Q96PP4 275 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 AGAP2Q99490 1192 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 ZNF670Q9BS34 389 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 POLR1EQ9GZS1 481 aaKnown RBP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 ABCG8Q9H221 673 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 RBM22Q9NW64 420 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABPB1-206ENST00000543881 KCTD5Q9NXV2 234 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 UVRAGQ9P2Y5 699 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 SUFUQ9UMX1 484 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 CHKBQ9Y259 395 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 SLC17A4Q9Y2C5 497 aa11.81□□□□□ -0.52
GABPB1-206ENST00000543881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.525e-6■■■■□ 23.6
GABPB1-206ENST00000543881 A0A0J9YYE9 177 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 GOLGA6BA6NDN3 693 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 B4GAT1O43505 415 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TRBC1P01850 177 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 HLA-DQB2P05538 268 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 H2AFZP0C0S5 128 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 GOLGA6DP0CG33 693 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 FGF3P11487 239 aaPredicted RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 CCNCP24863 283 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 GNPDA1P46926 289 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 ARSDP51689 593 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 PDK2Q15119 407 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 H2AFVQ71UI9 128 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TRIM74Q86UV6 250 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 C9orf43Q8TAL5 461 aaPredicted RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 PATE1Q8WXA2 126 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 SCAMP4Q969E2 229 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 PMEPA1Q969W9 287 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TAAR9Q96RI9 348 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 NUDT22Q9BRQ3 303 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 CDH19Q9H159 772 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 ZNF71Q9NQZ8 489 aaPredicted RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TRNAU1APQ9NX07 287 aaKnown RBP11.8□□□□□ -0.52
GABPB1-206ENST00000543881 GOLGA6AQ9NYA3 693 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TAAR2Q9P1P5 351 aa11.8□□□□□ -0.52
GABPB1-206ENST00000543881 TMEM98Q9Y2Y6 226 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms