RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 EFR3BQ9Y2G0 817 aa9.7□□□□□ -0.86
TNFRSF1A-214ENST00000543048 C1orf232A0A0U1RR37 186 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PRSS38A1L453 326 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SRRM3A6NNA2 597 aaPredicted RBP9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FUCA1P04066 466 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PECAM1P16284 738 aaPredicted RBP9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 POLD2P49005 469 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SPINT3P49223 89 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RWDD2BP57060 319 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 WASHC5Q12768 1159 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TCEA2Q15560 299 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCDC181Q5TID7 509 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 KCTD16Q68DU8 428 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GUSBP11Q6P575 273 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 BBS12Q6ZW61 710 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PID1Q7Z2X4 250 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PROSER1Q86XN7 944 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ARL10Q8N8L6 244 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LRRC57Q8N9N7 239 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FAM46DQ8NEK8 389 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 OR6C4Q8NGE1 309 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SPATA22Q8NHS9 363 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MDM1Q8TC05 714 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GPBAR1Q8TDU6 330 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SCAMP4Q969E2 229 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PDXPQ96GD0 296 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HIC2Q96JB3 615 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRIB3Q96RU7 358 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 VAT1Q99536 393 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RIOK2Q9BVS4 552 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FRMD8Q9BZ67 464 aaPredicted RBP9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 OSBPL8Q9BZF1 889 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NRSN2Q9GZP1 204 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TMEM168Q9H0V1 697 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CARS2Q9HA77 564 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZFYVE1Q9HBF4 777 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MAGEE1Q9HCI5 957 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRNAU1APQ9NX07 287 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PKD2L2Q9NZM6 624 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SIRPGQ9P1W8 387 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRHDEQ9UKU6 1024 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 AK5Q9Y6K8 562 aa9.69□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 COL27A1Q8IZC6 1860 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LAMA5O15230 3695 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FREM2Q5SZK8 3169 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GRID2IPA4D2P6 1211 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 H7C0C1 242 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 APOC4-APOC2K7ER74 178 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NRDCO43847 1150 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PMPCBO75439 489 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 KRT37O76014 449 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NDST3O95803 873 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MT-CYBP00156 380 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SOD1P00441 154 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 EPOP01588 193 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 APOC2P02655 101 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 IVLP07476 585 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CD68P34810 354 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PTPN7P35236 360 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GNPDA1P46926 289 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ATP5OP48047 213 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PEX6Q13608 980 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GALNT3Q14435 633 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RTP5Q14D33 572 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PCSK7Q16549 785 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PERM1Q5SV97 790 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PEX26Q7Z412 305 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TMC3Q7Z5M5 1100 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SYCE1Q8N0S2 351 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZNF567Q8N184 647 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RNF10Q8N5U6 811 aaKnown RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GPR156Q8NFN8 814 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCL4L1Q8NHW4 92 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 WDR48Q8TAF3 677 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HTR3CQ8WXA8 447 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GRAMD1AQ96CP6 724 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HAUS1Q96CS2 278 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SCARF2Q96GP6 870 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 COX14Q96I36 57 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 QKIQ96PU8 341 aaKnown RBP eCLIP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 DEPDC7Q96QD5 511 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FCRL5Q96RD9 977 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 WDR24Q96S15 920 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 AGAP2Q99490 1192 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FERMT1Q9BQL6 677 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RAD18Q9NS91 495 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 KLHL8Q9P2G9 620 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FAM153AQ9UHL3 310 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CNOT6Q9ULM6 557 aaKnown RBP9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SUFUQ9UMX1 484 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SLC17A4Q9Y2C5 497 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TMEM98Q9Y2Y6 226 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GPSM3Q9Y4H4 160 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CHD6Q8TD26 2715 aa9.68□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LOC285095A0A1B0GVY8 99 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MACROD2A1Z1Q3 448 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CSO75390 466 aaKnown RBP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TCEA3O75764 348 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms