RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 NME1P15531 152 aaKnown RBP19.33■□□□□ 0.68
DDX55-207ENST00000540763 PSMA3P25788 255 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 SPAM1P38567 509 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 HADHAP40939 763 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 VPS41P49754 854 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 ZNF140P52738 457 aaPredicted RBP19.33■□□□□ 0.68
DDX55-207ENST00000540763 SARNPP82979 210 aaKnown RBP19.33■□□□□ 0.68
DDX55-207ENST00000540763 DR1Q01658 176 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 WHAMMP3Q1A5X7 153 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 KLHL7Q8IXQ5 586 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 KIF18AQ8NI77 898 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 RIMKLBQ9ULI2 386 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 FNDC3AQ9Y2H6 1198 aaKnown RBP19.33■□□□□ 0.68
DDX55-207ENST00000540763 ARL5AQ9Y689 179 aa19.33■□□□□ 0.68
DDX55-207ENST00000540763 ACACBO00763 2458 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 ASCC3Q8N3C0 2202 aaKnown RBP19.32■□□□□ 0.68
DDX55-207ENST00000540763 GOLGA8CPA6NN73 597 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 H3BM21 787 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 LDB2O43679 373 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 URI1O94763 535 aaPredicted RBP19.32■□□□□ 0.68
DDX55-207ENST00000540763 CSF2P04141 144 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 EPHA8P29322 1005 aaPredicted RBP19.32■□□□□ 0.68
DDX55-207ENST00000540763 BLKP51451 505 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 HNRNPKP61978 463 aaKnown RBP eCLIP19.32■□□□□ 0.68
DDX55-207ENST00000540763 TPRG1LQ5T0D9 272 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 LRRC8BQ6P9F7 803 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 KDM7AQ6ZMT4 941 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 PCGF5Q86SE9 256 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 JAMLQ86YT9 394 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 MCUQ8NE86 351 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 BTN2A2Q8WVV5 523 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 CPT1BQ92523 772 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 PEX13Q92968 403 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 COX14Q96I36 57 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 HIC2Q96JB3 615 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 VPS35Q96QK1 796 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 SPATA16Q9BXB7 569 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 IL21RQ9HBE5 538 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 TM7SF3Q9NS93 570 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 ASIC3Q9UHC3 531 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 EPG5Q9HCE0 2579 aa19.32■□□□□ 0.68
DDX55-207ENST00000540763 CABIN1Q9Y6J0 2220 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 HEATR9A2RTY3 570 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 MROH6A6NGR9 719 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 H7C0S8 307 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 MLNP12872 115 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 GRIA1P42261 906 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 EIF2B5Q13144 721 aaKnown RBP19.31■□□□□ 0.68
DDX55-207ENST00000540763 ITGA9Q13797 1035 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 POU6F1Q14863 301 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 SUZ12Q15022 739 aaKnown RBP19.31■□□□□ 0.68
DDX55-207ENST00000540763 SHBQ15464 509 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 DBX2Q6ZNG2 339 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 NLRP9Q7RTR0 991 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 HOOK3Q86VS8 718 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 PPIL6Q8IXY8 311 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 OR56A4Q8NGH8 313 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 OR2I1PQ8NGU4 316 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 STYXQ8WUJ0 223 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 ZNF592Q92610 1267 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 AGAP2Q99490 1192 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 FRMD8Q9BZ67 464 aaPredicted RBP19.31■□□□□ 0.68
DDX55-207ENST00000540763 IL22Q9GZX6 179 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 BPIFA1Q9NP55 256 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 IL26Q9NPH9 171 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 SMOXQ9NWM0 555 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 APPL1Q9UKG1 709 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 MRFAP1Q9Y605 127 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 DGKBQ9Y6T7 804 aa19.31■□□□□ 0.68
DDX55-207ENST00000540763 ZFC3H1O60293 1989 aaKnown RBP19.3■□□□□ 0.68
DDX55-207ENST00000540763 GLYATL1P3A0A0U1RQE8 302 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 DCDC2BA2VCK2 349 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 FAM187AA6NFU0 413 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 C4orf47A7E2U8 309 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 FADS2P1A8MWK0 482 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 SMAPO00193 183 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 DNALI1O14645 258 aaPredicted RBP19.3■□□□□ 0.68
DDX55-207ENST00000540763 NDC80O14777 642 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 SLC30A4O14863 429 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 RASGRP1O95267 797 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 TPH1P17752 444 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 ADRA1DP25100 572 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 ADCY8P40145 1251 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 NPY2RP49146 381 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 PPARDQ03181 441 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 INAVAQ3KP66 663 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 RNASEH2BQ5TBB1 312 aaKnown RBP19.3■□□□□ 0.68
DDX55-207ENST00000540763 ALS2CLQ60I27 953 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 ZNF534Q76KX8 674 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 MAATS1Q7Z4T9 603 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 NAT8LQ8N9F0 302 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 OR4K2Q8NGD2 314 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 PTCD2Q8WV60 388 aaKnown RBP19.3■□□□□ 0.68
DDX55-207ENST00000540763 KRT12Q99456 494 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 LGR4Q9BXB1 951 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 XAB2Q9HCS7 855 aaKnown RBP19.3■□□□□ 0.68
DDX55-207ENST00000540763 NLE1Q9NVX2 485 aaPredicted RBP19.3■□□□□ 0.68
DDX55-207ENST00000540763 DNAJC28Q9NX36 388 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 BFARQ9NZS9 450 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 VPS18Q9P253 973 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms