RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CBY3A6NI87 242 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 AQP12BA6NM10 295 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 E7EVH7 732 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 H0YIN7 160 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 BCL2L11O43521 198 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CEP104O60308 925 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CLPTM1O96005 669 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 TPOP07202 933 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 FAM157CP0CG43 387 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 IGHV4-38-2P0DP08 117 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ETFAP13804 333 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CSF2RAP15509 400 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 POLR2CP19387 275 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 MAOAP21397 527 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 UBA1P22314 1058 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 ITGA3P26006 1051 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 LIMK2P53671 638 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 SNX16P57768 344 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 PLIN5Q00G26 463 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CHRNDQ07001 517 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 COX10Q12887 443 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 LRMPQ12912 555 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ELAVL2Q12926 359 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 HLTFQ14527 1009 aaKnown RBP eCLIP0.72□□□□□ -2.29
COPB1-212ENST00000534771 KIR2DS3Q14952 304 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 EIF2S3LQ2VIR3 472 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 SLC45A4Q5BKX6 768 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CBWD5Q5RIA9 395 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ALS2CLQ60I27 953 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 DMKNQ6E0U4 476 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 PWWP2BQ6NUJ5 590 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 DUS1LQ6P1R4 473 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 BRAT1Q6PJG6 821 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CPLX2Q6PUV4 134 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 ZNF704Q6ZNC4 412 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 GPRIN3Q6ZVF9 776 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 MOB3CQ70IA8 216 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ANO5Q75V66 913 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 LINGO2Q7L985 606 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 PIWIL4Q7Z3Z4 852 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 KIAA2013Q8IYS2 634 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 SCML4Q8N228 414 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 Q8N377 158 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ZNF843Q8N446 348 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 SPATA6LQ8N4H0 392 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ZCCHC9Q8N567 271 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 BEST2Q8NFU1 509 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 OR2AK2Q8NG84 335 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 THAP6Q8TBB0 222 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 SH3KBP1Q96B97 665 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 FBXL8Q96CD0 374 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 KTI12Q96EK9 354 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 RNFT2Q96EX2 444 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 MASTLQ96GX5 879 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 TWNKQ96RR1 684 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 SIN3AQ96ST3 1273 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 SOSTQ9BQB4 213 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 MXRA8Q9BRK3 442 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 GPATCH1Q9BRR8 931 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 LRRC61Q9BV99 259 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 RAB11FIP5Q9BXF6 653 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 TRIM6Q9C030 488 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 LRMDAQ9H2I8 198 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 NDST4Q9H3R1 872 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ESRP2Q9H6T0 727 aaKnown RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 MAGEE1Q9HCI5 957 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 MMP25Q9NPA2 562 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 OBP2BQ9NPH6 170 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 GPR108Q9NPR9 543 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ZNF71Q9NQZ8 489 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 ECHDC1Q9NTX5 307 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 MARCH4Q9P2E8 410 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 ZDHHC2Q9UIJ5 367 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 CD207Q9UJ71 328 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 FLT1P17948 1338 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 PCNX3Q9H6A9 2034 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GIMAP1-GIMAP5A0A087WTJ2 511 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 A0A087WW49 117 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 C17orf113A0A1B0GUU1 675 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 TMEM129A0AVI4 362 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 MAGEB17A8MXT2 336 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 KPNA7A9QM74 516 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 PLOD2O00469 737 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 PMM2O15305 246 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 EIF3DO15371 548 aaKnown RBP eCLIP0.71□□□□□ -2.3
COPB1-212ENST00000534771 KRT38O76015 456 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 AP2A2O94973 939 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RAF1P04049 648 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 CYC1P08574 325 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 MYL3P08590 195 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 CSF1P09603 554 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 ACADMP11310 421 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 TRIM27P14373 513 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GNAZP19086 355 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 ITIH1P19827 911 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 MSH3P20585 1137 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 AGAP20933 346 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 NFKBIAP25963 317 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 HNF4AP41235 474 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms