RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CALML6Q8TD86 181 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 COPS7BQ9H9Q2 264 aaPredicted RBP18.28■□□□□ 0.52
SDC2-202ENST00000518385 TREX1Q9NSU2 369 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 ZNHIT2Q9UHR6 403 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 MSRAQ9UJ68 235 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 SLC8A2Q9UPR5 921 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 MYRFQ9Y2G1 1151 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 CEPT1Q9Y6K0 416 aa18.28■□□□□ 0.52
SDC2-202ENST00000518385 A0A087X1B8 175 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 LOC285095A0A1B0GVY8 99 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 TRIM64CA6NLI5 447 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 SORBS2O94875 1100 aaKnown RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 F11P03951 625 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 C8AP07357 584 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 ZNF26P17031 533 aaPredicted RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 CDH2P19022 906 aaPredicted RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 SLC6A4P31645 630 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 ERFP50548 548 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 PTK2BQ14289 1009 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 ZNF235Q14590 738 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 RAB30Q15771 203 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 KIAA0408Q6ZU52 694 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 CMC1Q7Z7K0 106 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 CARM1Q86X55 608 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 PLD6Q8N2A8 252 aaKnown RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 TNIP2Q8NFZ5 429 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 ARRDC2Q8TBH0 407 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 PRPF18Q99633 342 aaKnown RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 PKP2Q99959 881 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 C1QTNF1Q9BXJ1 281 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 SHCBP1LQ9BZQ2 653 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 GRIP2Q9C0E4 1043 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 PDFQ9HBH1 243 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 IARS2Q9NSE4 1012 aaKnown RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 AP4S1Q9Y587 144 aa18.27■□□□□ 0.52
SDC2-202ENST00000518385 ZFP37Q9Y6Q3 630 aaPredicted RBP18.27■□□□□ 0.52
SDC2-202ENST00000518385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 A0A1B0GVM2 712 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 TCAF2A6NFQ2 919 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 KDELR3O43731 214 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 PFDN1O60925 122 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 CSPG5O95196 566 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 VAPBO95292 243 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 LRG1P02750 347 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 MMP2P08253 660 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 HLA-DPA1P20036 260 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 MPSTP25325 297 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 CORO1AP31146 461 aaKnown RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 CD86P42081 329 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 ARCN1P48444 511 aaKnown RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 ACADVLP49748 655 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 SFSWAPQ12872 951 aaKnown RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 ZNF177Q13360 481 aaPredicted RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 POU6F1Q14863 301 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 FAM45BPQ6NSW5 357 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 CHSY3Q70JA7 882 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 GALNT7Q86SF2 657 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 TMEM150AQ86TG1 271 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 DENND1CQ8IV53 801 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 TRIML2Q8N7C3 387 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 FAM45AQ8TCE6 357 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 GAB3Q8WWW8 586 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 EME1Q96AY2 570 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 FEM1CQ96JP0 617 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 TRIM15Q9C019 465 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 NKX2-4Q9H2Z4 354 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 TASP1Q9H6P5 420 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 EML4Q9HC35 981 aaKnown RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 ZNF334Q9HCZ1 680 aaPredicted RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 NCKIPSDQ9NZQ3 722 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 SEPT3Q9UH03 358 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 RIMKLBQ9ULI2 386 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 MTCL1Q9Y4B5 1905 aaKnown RBP18.26■□□□□ 0.51
SDC2-202ENST00000518385 CHD5Q8TDI0 1954 aa18.26■□□□□ 0.51
SDC2-202ENST00000518385 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 TARM1B6A8C7 271 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 H3BNH8 94 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 CDK4P11802 303 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ENO3P13929 434 aaPredicted RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 PFKLP17858 780 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 BMP8BP34820 402 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ACVRL1P37023 503 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ADARP55265 1226 aaKnown RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 ESRRGP62508 458 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ARL13AQ5H913 290 aaPredicted RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 SAMD4BQ5PRF9 694 aaKnown RBP18.25■□□□□ 0.51
SDC2-202ENST00000518385 PRMT9Q6P2P2 845 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 LILRA2Q8N149 483 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ANKFN1Q8N957 763 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ADAMTS16Q8TE57 1224 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 SLC22A17Q8WUG5 538 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 AGAP2Q99490 1192 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 CCT7Q99832 543 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 ANKRD60Q9BZ19 345 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 IL21Q9HBE4 155 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 PLGRKTQ9HBL7 147 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 PREBQ9HCU5 417 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 MAN1C1Q9NR34 630 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 SLC17A6Q9P2U8 582 aa18.25■□□□□ 0.51
SDC2-202ENST00000518385 AGO1Q9UL18 857 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms