RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 SLC2A7Q6PXP3 512 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 CHST3Q7LGC8 479 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 CCDC186Q7Z3E2 898 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 CACNA2D4Q7Z3S7 1137 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 TC2NQ8N9U0 490 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 INPP5DQ92835 1189 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 HAUS8Q9BT25 410 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 GDE1Q9NZC3 331 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 OR6C3Q9NZP0 311 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 OR14J1Q9UGF5 321 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 AMACRQ9UHK6 382 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 ANAPC5Q9UJX4 755 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 WBP11Q9Y2W2 641 aaKnown RBP7.41□□□□□ -1.22
NUP54-215ENST00000514313 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.41□□□□□ -1.22
NUP54-215ENST00000514313 ZMYM2Q9UBW7 1377 aa7.41□□□□□ -1.22
NUP54-215ENST00000514313 KANSL1LA0AUZ9 987 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 CPED1A4D0V7 1026 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 J3KR12 359 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 MAP2K7O14733 419 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 KCNK5O95279 499 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 CCDC175P0C221 793 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 ST3GAL1Q11201 340 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 TFCP2Q12800 502 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 LRCH2Q5VUJ6 765 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 DAB2IPQ5VWQ8 1189 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 PARM1Q6UWI2 310 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 CAMKMTQ7Z624 323 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 XXYLT1Q8NBI6 393 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 MRPS27Q92552 414 aaKnown RBP7.4□□□□□ -1.22
NUP54-215ENST00000514313 CHFRQ96EP1 664 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 RTN4RQ9BZR6 473 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 SLCO5A1Q9H2Y9 848 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 GRPEL1Q9HAV7 217 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 MMP25Q9NPA2 562 aa7.4□□□□□ -1.22
NUP54-215ENST00000514313 SRPRBQ9Y5M8 271 aaKnown RBP7.4□□□□□ -1.22
NUP54-215ENST00000514313 TMEM272A0A1B0GTI8 110 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 MAGEB17A8MXT2 336 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 I6L893 689 aaPredicted RBP7.39□□□□□ -1.23
NUP54-215ENST00000514313 M0QZ24 198 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 TIMM23O14925 209 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 TADA2AO75478 443 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 RBMXL2O75526 392 aaKnown RBP7.39□□□□□ -1.23
NUP54-215ENST00000514313 SLCO2B1O94956 709 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 NDUFB8O95169 186 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 IFNAR1P17181 557 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 GNLYP22749 145 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 ADORA2A-AS1P86434 159 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 DDR1Q08345 913 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 B3GNT6Q6ZMB0 384 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 RBPMS2Q6ZRY4 209 aaKnown RBP7.39□□□□□ -1.23
NUP54-215ENST00000514313 SHFQ7M4L6 423 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 GGNQ86UU5 652 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 OR1J2Q8NGS2 313 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 TEKT4Q8WW24 435 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 TRIB2Q92519 343 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 SECISBP2LQ93073 1101 aaKnown RBP7.39□□□□□ -1.23
NUP54-215ENST00000514313 ZFYVE19Q96K21 471 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 LINC00615Q96LM1 132 aaPredicted RBP7.39□□□□□ -1.23
NUP54-215ENST00000514313 FER1L6-AS2Q96M78 137 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 SPATC1LQ9H0A9 340 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 SEBOXQ9HB31 216 aaPredicted RBP7.39□□□□□ -1.23
NUP54-215ENST00000514313 OSGIN1Q9UJX0 560 aa7.39□□□□□ -1.23
NUP54-215ENST00000514313 CLGNO14967 610 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 ZWINTO95229 277 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 EGFP01133 1207 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 VDRP11473 427 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 MUTP22033 750 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 RASSF2P50749 326 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 ARSEP51690 589 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 CSE1LP55060 971 aaKnown RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 CTTNQ14247 550 aaKnown RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 C10orf25Q5T742 122 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 DCAF12L2Q5VW00 463 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 DCLRE1AQ6PJP8 1040 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 Q6ZSV7 163 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 MON1BQ7L1V2 547 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 HAUS6Q7Z4H7 955 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 LDB1Q86U70 411 aaPredicted RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 ADIPOR2Q86V24 386 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 ADGRG3Q86Y34 549 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 MIGA1Q8NAN2 632 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 RBM15BQ8NDT2 890 aaKnown RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 HM13Q8TCT9 377 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 JAKMIP1Q96N16 626 aaKnown RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 NAA11Q9BSU3 229 aaPredicted RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 FAM129AQ9BZQ8 928 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 GOLPH3LQ9H4A5 285 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 MAGIXQ9H6Y5 334 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 UBA2Q9UBT2 640 aaPredicted RBP7.38□□□□□ -1.23
NUP54-215ENST00000514313 STK39Q9UEW8 545 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 HACL1Q9UJ83 578 aa7.38□□□□□ -1.23
NUP54-215ENST00000514313 ARID1BQ8NFD5 2236 aaPredicted RBP7.37□□□□□ -1.23
NUP54-215ENST00000514313 CYR61O00622 381 aa7.37□□□□□ -1.23
NUP54-215ENST00000514313 WNT9BO14905 357 aa7.37□□□□□ -1.23
NUP54-215ENST00000514313 SPRY1O43609 319 aaPredicted RBP7.37□□□□□ -1.23
NUP54-215ENST00000514313 EPN2O95208 641 aa7.37□□□□□ -1.23
NUP54-215ENST00000514313 DDX5P17844 614 aaKnown RBP7.37□□□□□ -1.23
NUP54-215ENST00000514313 HNRNPH1P31943 449 aaKnown RBP7.37□□□□□ -1.23
NUP54-215ENST00000514313 RBP5P82980 135 aa7.37□□□□□ -1.23
NUP54-215ENST00000514313 PPP2R2BQ00005 443 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms