RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HSPH1Q92598 858 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 SEPT8Q92599 483 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 INTS12Q96CB8 462 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 WDYHV1Q96HA8 205 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 RITA1Q96K30 269 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 SGCZQ96LD1 299 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 COG8Q96MW5 612 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 RAB3IPQ96QF0 476 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 CDRT15Q96T59 188 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 DHRS9Q9BPW9 319 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 MACROD1Q9BQ69 325 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCDC77Q9BR77 488 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 MRPL9Q9BYD2 267 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRT23Q9C075 422 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 NCOR1P1Q9H4R4 102 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 DIABLOQ9NR28 239 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 ATP8A2Q9NTI2 1148 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 ARL8BQ9NVJ2 186 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMOD3Q9NYL9 352 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 THEGQ9P2T0 379 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 HMGXB4Q9UGU5 601 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 AGO2Q9UKV8 859 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 FZD4Q9ULV1 537 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 HPCAL4Q9UM19 191 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAGED2Q9UNF1 606 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 RRP7AQ9Y3A4 280 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 LRRC42Q9Y546 428 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 HEG1Q9ULI3 1381 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 COL3A1P02461 1466 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 TOPAZ1Q8N9V7 1692 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 ITIH6Q6UXX5 1313 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLIT2O94813 1529 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NFAT5O94916 1531 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTAGE15A4D2H0 777 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 OR2W5A6NFC9 320 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 E7EVH7 732 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 PI4K2BG5E9Z4 385 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 AGPSO00116 658 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 TRDMT1O14717 391 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NBNO60934 754 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMCC2O75069 709 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CNOT3O75175 753 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 BAG2O95816 211 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CRYZL1O95825 349 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SYF2O95926 243 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 HLA-DRAP01903 254 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTAGE8P0CG41 777 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NAGAP17050 411 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 POLR2CP19387 275 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 DRD1P21728 446 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 TBXAS1P24557 533 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 GABRB3P28472 473 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CRABP2P29373 138 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 IFNA8P32881 189 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MMP13P45452 471 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 ABCG1P45844 678 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 HSPA13P48723 471 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NR2C2P49116 596 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 STAT2P52630 851 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 PLTPP55058 493 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRTAP10-9P60411 292 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 HSF1Q00613 529 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 GHRHRQ02643 423 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SCRN3Q0VDG4 424 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MTX1Q13505 466 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 BFSP2Q13515 415 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 STARD3Q14849 445 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 TRIP6Q15654 476 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 STK11Q15831 433 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 PKN2Q16513 984 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 PTGISQ16647 500 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MOGQ16653 247 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLC35G1Q2M3R5 365 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 KLHL38Q2WGJ6 581 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MYLK3Q32MK0 819 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 Q3ZCU0 254 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 PGBD2Q6P3X8 592 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF782Q6ZMW2 699 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANO5Q75V66 913 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTAGE6Q86UF2 777 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NLRP14Q86W24 1093 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 STX12Q86Y82 276 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 GATAD2AQ86YP4 633 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLC44A2Q8IWA5 706 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 UEVLDQ8IX04 471 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTAGE4Q8IX94 777 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CADM3Q8N126 398 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 NUP93Q8N1F7 819 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 METTL25Q8N6Q8 603 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 LINS1Q8NG48 757 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 OSR1Q8TAX0 266 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 AFG1LQ8WV93 481 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 RASSF5Q8WWW0 418 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 DPF1Q92782 380 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 KIAA1191Q96A73 305 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 CIDECQ96AQ7 238 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 EME1Q96AY2 570 aa4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMA16Q96EY4 203 aaKnown RBP4.72□□□□□ -1.65
HMGB3P13-201ENST00000511263 C11orf24Q96F05 449 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms