RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CHST15Q7LFX5 561 aaPredicted RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 FAM35AQ86V20 835 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 TMCO5AQ8N6Q1 288 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 ANKRD49Q8WVL7 239 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 MUL1Q969V5 352 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 ING2Q9H160 280 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 DDIT4Q9NX09 232 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 PIP5K1BO14986 540 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 MATN3O15232 486 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 UGT2B11O75310 529 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 THRBP10828 461 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 MTHFD1P11586 935 aaKnown RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 ZNF24P17028 368 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 ITIH1P19827 911 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 ELK4P28324 431 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 SHMT2P34897 504 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 GJA8P48165 433 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 CCNA1P78396 465 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 NFYCQ13952 458 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 GRB7Q14451 532 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 RAB41Q5JT25 222 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 ZNF618Q5T7W0 954 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 OSTM1Q86WC4 334 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 BPIFB6Q8NFQ5 453 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 BIRC7Q96CA5 298 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 CHID1Q9BWS9 393 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 ULBP1Q9BZM6 244 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 NTN4Q9HB63 628 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 MAGEL2Q9UJ55 1249 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 YJEFN3A6XGL0 299 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 UPK1AO00322 258 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 BCAS1O75363 584 aaPredicted RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 JRKO75564 520 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 MT-CO1P00395 513 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 ENO2P09104 434 aaPredicted RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 KCNE1P15382 129 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 EEF1DP29692 281 aaKnown RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 EMX2Q04743 252 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 ARHGAP1Q07960 439 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 RPS6KA2Q15349 733 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 TBPL2Q6SJ96 375 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 SLC16A12Q6ZSM3 486 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 RAB44Q7Z6P3 723 aaPredicted RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 FBXO16Q8IX29 292 aaPredicted RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 C8orf59Q8N0T1 100 aaPredicted RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 ATPAF2Q8N5M1 289 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 MRGPRX2Q96LB1 330 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 FEM1AQ9BSK4 669 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 WDCPQ9H6R7 721 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 ALG9Q9H6U8 611 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 LEF1Q9UJU2 399 aaPredicted RBP17.69■□□□□ 0.42
NUP54-205ENST00000507257 MCM3APO60318 1980 aa17.69■□□□□ 0.42
NUP54-205ENST00000507257 SLC7A4O43246 635 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 MGEA5O60502 916 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 NTRK1P04629 796 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 GSTT2P0CG29 244 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 GSTT2BP0CG30 244 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 HPCAL1P37235 193 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 KCNK10P57789 538 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 ZNF789Q5FWF6 425 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 R3HCC1LQ7Z5L2 792 aaKnown RBP17.68■□□□□ 0.42
NUP54-205ENST00000507257 CILP2Q8IUL8 1156 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 ARHGAP12Q8IWW6 846 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 RHEBL1Q8TAI7 183 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 SLC22A17Q8WUG5 538 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 CGREF1Q99674 301 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 FSD1LQ9BXM9 530 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 SOX17Q9H6I2 414 aaPredicted RBP17.68■□□□□ 0.42
NUP54-205ENST00000507257 POPDC3Q9HBV1 291 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 POLG2Q9UHN1 485 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 PCDHB3Q9Y5E6 796 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 ASPDHA6ND91 283 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 RECQL4O94761 1208 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 APBA3O96018 575 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 HGFP14210 728 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 HRH2P25021 359 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 HOXC13P31276 330 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 KCNC1P48547 511 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 YBX1P67809 324 aaKnown RBP17.68■□□□□ 0.42
NUP54-205ENST00000507257 AQP6Q13520 282 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 CRTC3Q6UUV7 619 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 TMEM207Q6UWW9 146 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 EFL1Q7Z2Z2 1120 aaKnown RBP17.68■□□□□ 0.42
NUP54-205ENST00000507257 TMEM199Q8N511 208 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 PJA1Q8NG27 643 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 STARD8Q92502 1023 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 FUNDC2Q9BWH2 189 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 BRINP2Q9C0B6 783 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 TKTL2Q9H0I9 626 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 TUBB1Q9H4B7 451 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 ATP13A1Q9HD20 1204 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 FBXO8Q9NRD0 319 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 AIG1Q9NVV5 245 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
NUP54-205ENST00000507257 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 FZD1Q9UP38 647 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms