RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 RFLNAQ6ZTI6 216 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 TMPRSS9Q7Z410 1059 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 VSIG1Q86XK7 387 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 GALNT13Q8IUC8 556 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 CCDC13Q8IYE1 715 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 PQLC3Q8N755 202 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 CCNYQ8ND76 341 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 PTCD2Q8WV60 388 aaKnown RBP19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 SEMA6CQ9H3T2 930 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 DEF6Q9H4E7 631 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 RDH14Q9HBH5 336 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 WDR70Q9NW82 654 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 ZNHIT6Q9NWK9 470 aaKnown RBP19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 VPS18Q9P253 973 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 TMEM98Q9Y2Y6 226 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 PCDHB11Q9Y5F2 797 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 ST14Q9Y5Y6 855 aa19.85■□□□□ 0.77
UBE2D3-220ENST00000505307 CBFA2T2O43439 604 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 MAP3K6O95382 1288 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 ZIC2O95409 532 aaPredicted RBP19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 HLA-DQB2P05538 268 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 TMEM253P0C7T8 217 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 ITIH1P19827 911 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 KDELR1P24390 212 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 CD1CP29017 333 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 GPLD1P80108 840 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 GBE1Q04446 702 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 NIPAL4Q0D2K0 466 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 IHHQ14623 411 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 USP53Q70EK8 1073 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 LPCAT1Q8NF37 534 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 OR4D9Q8NGE8 314 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 CCHCR1Q8TD31 782 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 USP7Q93009 1102 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 RNF157Q96PX1 679 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 DNAJC7Q99615 494 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 RIOK2Q9BVS4 552 aaKnown RBP19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 ADGRE3Q9BY15 652 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 XPO4Q9C0E2 1151 aaKnown RBP19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 RMI1Q9H9A7 625 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 DTLQ9NZJ0 730 aa19.84■□□□□ 0.77
UBE2D3-220ENST00000505307 COL6A6A6NMZ7 2263 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 ATMQ13315 3056 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 SCN8AQ9UQD0 1980 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 PRAMEF33A0A0G2JMD5 474 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 A0A0U1RQS6 177 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 PRAMEF10O60809 474 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 CLDN7O95471 211 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 ARHGAP25P42331 645 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 FASLGP48023 281 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 LIMK2P53671 638 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 MAPK10P53779 464 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 PPIDQ08752 370 aaKnown RBP19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 C16orf72Q14CZ0 275 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 ASTE1Q2TB18 679 aaPredicted RBP19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 CCDC112Q8NEF3 446 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 MED8Q96G25 268 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 NUDT22Q9BRQ3 303 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 ANP32EQ9BTT0 268 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 MLPHQ9BV36 600 aaPredicted RBP19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 PKD2L2Q9NZM6 624 aa19.83■□□□□ 0.77
UBE2D3-220ENST00000505307 IGHV1OR21-1A0A087WYE8 117 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 IGHV5-10-1A0A0J9YXX1 117 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 C1orf232A0A0U1RR37 186 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 ANKRD66B4E2M5 251 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 PPM1DO15297 605 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 EFSO43281 561 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 AKR1B10O60218 316 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 ASMTLO95671 621 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 JCHAINP01591 159 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 TPM1P09493 284 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 ETV5P41161 510 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 SPINT3P49223 89 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 IFI35P80217 286 aaPredicted RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 SLC10A2Q12908 348 aaPredicted RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 MANEAQ5SRI9 462 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 KIAA1614Q5VZ46 1190 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 ZNF574Q6ZN55 896 aaPredicted RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 MARK2Q7KZI7 788 aaKnown RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 CPNE8Q86YQ8 564 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 PATE1Q8WXA2 126 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 RAPGEF5Q92565 580 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 SGF29Q96ES7 293 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 SMIM14Q96QK8 99 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 AGAP2Q99490 1192 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 MAK16Q9BXY0 300 aaKnown RBP19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 PACSIN1Q9BY11 444 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 FAM83DQ9H4H8 585 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 KCNK4Q9NYG8 393 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 ZNHIT2Q9UHR6 403 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 PCDHGA3Q9Y5H0 932 aa19.82■□□□□ 0.76
UBE2D3-220ENST00000505307 CFAP46Q8IYW2 2715 aa19.81■□□□□ 0.76
UBE2D3-220ENST00000505307 LRRD1A4D1F6 860 aa19.81■□□□□ 0.76
UBE2D3-220ENST00000505307 C9orf172C9J069 976 aa19.81■□□□□ 0.76
UBE2D3-220ENST00000505307 INPP4BO15327 924 aa19.81■□□□□ 0.76
UBE2D3-220ENST00000505307 ITGB2P05107 769 aa19.81■□□□□ 0.76
UBE2D3-220ENST00000505307 PLA2G2AP14555 144 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms