RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TSHRP16473 764 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 BPIP17213 487 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 HLA-DPA1P20036 260 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 CA5AP35218 305 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 GRK6P43250 576 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 GPR1P46091 355 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 POLD2P49005 469 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 SRP54P61011 504 aaKnown RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 GNG11P61952 73 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 DPTQ07507 201 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 MSLNQ13421 630 aaPredicted RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 PTK2BQ14289 1009 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 CCNG2Q16589 344 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 PARP6Q2NL67 630 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 HENMT1Q5T8I9 393 aaKnown RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 DOK6Q6PKX4 331 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 ZNF765Q7L2R6 523 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 LMX1AQ8TE12 382 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 PBKQ96KB5 322 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 TBL1YQ9BQ87 522 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 FRMD8P1Q9BZ68 369 aaPredicted RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 CLPBQ9H078 707 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 TOR4AQ9NXH8 423 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 PKD2L2Q9NZM6 624 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 KLQ9UEF7 1012 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 APOBEC3BQ9UH17 382 aaKnown RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 CNOT6Q9ULM6 557 aaKnown RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 SNX12Q9UMY4 172 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 TMEM98Q9Y2Y6 226 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 KCTD3Q9Y597 815 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 PCYT1BQ9Y5K3 369 aaPredicted RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 OAS3Q9Y6K5 1087 aaKnown RBP11.6□□□□□ -0.55
UBA3-211ENST00000493957 UNC13CQ8NB66 2214 aa11.6□□□□□ -0.55
UBA3-211ENST00000493957 CACNB4O00305 520 aaPredicted RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 TOR1BO14657 336 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 YKT6O15498 198 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 SIGLEC6O43699 453 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 TOP3BO95985 862 aaKnown RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 CEACAM5P06731 702 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 MYCLP1P12525 358 aaPredicted RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 RPL22P35268 128 aaKnown RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 HK3P52790 923 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 HNRNPKP61978 463 aaKnown RBP eCLIP11.59□□□□□ -0.55
UBA3-211ENST00000493957 SIM1P81133 766 aaPredicted RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 PPARDQ03181 441 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 DNAJC3Q13217 504 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 PRPSAP1Q14558 356 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 SUZ12Q15022 739 aaKnown RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 TRIP6Q15654 476 aaKnown RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 DEFB133Q30KQ1 61 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 P3H1Q32P28 736 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 PRRT3Q5FWE3 981 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 ZNF648Q5T619 568 aaPredicted RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 CCDC70Q6NSX1 233 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 ADAMTSL4Q6UY14 1074 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 GLT6D1Q7Z4J2 308 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 SLCO6A1Q86UG4 719 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 NRSN1Q8IZ57 195 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 OR56A4Q8NGH8 313 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 CCL4L1Q8NHW4 92 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 CCHCR1Q8TD31 782 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 FRMD8Q9BZ67 464 aaPredicted RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 FAM83DQ9H4H8 585 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 SLC32A1Q9H598 525 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 PHPT1Q9NRX4 125 aaPredicted RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 MOSPD1Q9UJG1 213 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 TSR3Q9UJK0 312 aaKnown RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 TMPRSS11EQ9UL52 423 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 AAR2Q9Y312 384 aaKnown RBP11.59□□□□□ -0.55
UBA3-211ENST00000493957 ARL5AQ9Y689 179 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 KNTC1P50748 2209 aa11.59□□□□□ -0.55
UBA3-211ENST00000493957 AKAP13Q12802 2813 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 LY6G6EA0A0G2JKS1 128 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 PRSS38A1L453 326 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 H3BM21 787 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 GAPDHSO14556 408 aaPredicted RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 AQP9O43315 295 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 RASGRP1O95267 797 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 HOXC4P09017 264 aaPredicted RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 TPH1P17752 444 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 HTR1BP28222 390 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 TEAD1P28347 426 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 STIP1P31948 543 aaKnown RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 GRIA1P42261 906 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 TRIP13Q15645 432 aaPredicted RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 KHDC1Q4VXA5 237 aaKnown RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 CCDC157Q569K6 752 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 DRICH1Q6PGQ1 229 aaPredicted RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 MARK2Q7KZI7 788 aaKnown RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 SFTPA2Q8IWL1 248 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 PNPLA1Q8N8W4 532 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 COX14Q96I36 57 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 CNDP2Q96KP4 475 aaKnown RBP11.58□□□□□ -0.56
UBA3-211ENST00000493957 TMEM168Q9H0V1 697 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 CYP4F12Q9HCS2 524 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 IL17CQ9P0M4 197 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
UBA3-211ENST00000493957 TTC7AQ9ULT0 858 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms