RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 EPOP01588 193 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 ANXA6P08133 673 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 CKMT1AP12532 417 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 ILKQ13418 452 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 OLIG2Q13516 323 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 PRPSAP1Q14558 356 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 OASLQ15646 514 aaKnown RBP12.83□□□□□ -0.36
COL5A1-206ENST00000465877 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 ALS2CLQ60I27 953 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 DHRS13Q6UX07 377 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 TMC3Q7Z5M5 1100 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 GKN2Q86XP6 184 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 BLOC1S5Q8TDH9 187 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 COX14Q96I36 57 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 HIC2Q96JB3 615 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 BOCQ9BWV1 1114 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 FRMD8P1Q9BZ68 369 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-206ENST00000465877 FAM83DQ9H4H8 585 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 TRABDQ9H4I3 376 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 SUDS3Q9H7L9 328 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-206ENST00000465877 EVA1BQ9NVM1 165 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 SUFUQ9UMX1 484 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 SLC17A4Q9Y2C5 497 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
COL5A1-206ENST00000465877 NEUROG3Q9Y4Z2 214 aa12.83□□□□□ -0.36
COL5A1-206ENST00000465877 YY2O15391 372 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 ZSCAN12O43309 604 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 CEACAM5P06731 702 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 MYF5P13349 255 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 BPIP17213 487 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 ADRA1AP35348 466 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 HMGCLP35914 325 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 GNPDA1P46926 289 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 SIX1Q15475 284 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-206ENST00000465877 P3H1Q32P28 736 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 REXO1L1PQ8IX06 675 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 KLHDC8BQ8IXV7 354 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 SLC35F3Q8IY50 421 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 SDR16C5Q8N3Y7 309 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 KYQ8NBH2 561 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 GPR26Q8NDV2 337 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
COL5A1-206ENST00000465877 RTP4Q96DX8 246 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 APOL2Q9BQE5 337 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 ZSCAN5AQ9BUG6 496 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 SPATA16Q9BXB7 569 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 TMEM168Q9H0V1 697 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 CDH19Q9H159 772 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 RAD18Q9NS91 495 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 NCKIPSDQ9NZQ3 722 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 HACD3Q9P035 362 aa12.82□□□□□ -0.36
COL5A1-206ENST00000465877 OAS3Q9Y6K5 1087 aaKnown RBP12.82□□□□□ -0.36
COL5A1-206ENST00000465877 USP24Q9UPU5 2620 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 ASXL3Q9C0F0 2248 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 CELSR3Q9NYQ7 3312 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 AGTP01019 485 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 FGGP02679 453 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 IVLP07476 585 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 CDK4P11802 303 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 POLD2P49005 469 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 DUSP3P51452 185 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-206ENST00000465877 NR0B2Q15466 257 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 SMAD1Q15797 465 aaKnown RBP12.81□□□□□ -0.36
COL5A1-206ENST00000465877 HES3Q5TGS1 186 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 PDPK2PQ6A1A2 396 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 GUSBP11Q6P575 273 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 MARK2Q7KZI7 788 aaKnown RBP12.81□□□□□ -0.36
COL5A1-206ENST00000465877 PHYKPLQ8IUZ5 450 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 TRAM1L1Q8N609 369 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 ARL10Q8N8L6 244 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 IFI44Q8TCB0 444 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 C1orf54Q8WWF1 131 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 GLMNQ92990 594 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 OR2M4Q96R27 311 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 TBL1YQ9BQ87 522 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 BPIFA1Q9NP55 256 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 SIRPGQ9P1W8 387 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 VPS18Q9P253 973 aa12.81□□□□□ -0.36
COL5A1-206ENST00000465877 CNOT6Q9ULM6 557 aaKnown RBP12.81□□□□□ -0.36
COL5A1-206ENST00000465877 B4DGG1 531 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 USP12O75317 370 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 METTL18O95568 372 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ASMTLO95671 621 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 FUCA1P04066 466 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 GP1BAP07359 652 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 CXCR5P32302 372 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 SPAM1P38567 509 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 CLDN6P56747 220 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ILF3Q12906 894 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 SNX1Q13596 522 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 KCTD11Q693B1 232 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 LVRNQ6Q4G3 990 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 RANBP10Q6VN20 620 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms