RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 PLEKHM1Q9Y4G2 1056 aa20.93■□□□□ 0.94
VSX1-206ENST00000444511 MGAQ8IWI9 3026 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 PRAMEF33A0A0G2JMD5 474 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 INPP4BO15327 924 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 PRAMEF10O60809 474 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 CLDN7O95471 211 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 ASMTLO95671 621 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 MAN1A1P33908 653 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 ETV5P41161 510 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 GPR3P46089 330 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 NIPAL4Q0D2K0 466 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 C16orf72Q14CZ0 275 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 TGIF1Q15583 401 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 GALNT13Q8IUC8 556 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 CCDC13Q8IYE1 715 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 USP7Q93009 1102 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 HDAC11Q96DB2 347 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 AGAP2Q99490 1192 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 NUDT22Q9BRQ3 303 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 DTLQ9NZJ0 730 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 SEPT10Q9P0V9 454 aa20.92■□□□□ 0.94
VSX1-206ENST00000444511 PRLP01236 227 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 KDELR1P24390 212 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 SLC10A2Q12908 348 aaPredicted RBP20.91■□□□□ 0.94
VSX1-206ENST00000444511 LRP8Q14114 963 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 LY6DQ14210 128 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 MESDQ14696 234 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 PYCR3Q53H96 274 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 TMEM164Q5U3C3 297 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 RAVER1Q8IY67 606 aaKnown RBP20.91■□□□□ 0.94
VSX1-206ENST00000444511 OR8K1Q8NGG5 319 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 RAPGEF5Q92565 580 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 RNF157Q96PX1 679 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 ZNHIT6Q9NWK9 470 aaKnown RBP20.91■□□□□ 0.94
VSX1-206ENST00000444511 KALRNO60229 2985 aa20.91■□□□□ 0.94
VSX1-206ENST00000444511 GCN1Q92616 2671 aaKnown RBP20.9■□□□□ 0.94
VSX1-206ENST00000444511 C1orf232A0A0U1RR37 186 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 LRRD1A4D1F6 860 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 PPM1DO15297 605 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 JCHAINP01591 159 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 TMEM253P0C7T8 217 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 CD1CP29017 333 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 CD86P42081 329 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 TRIM14Q14142 442 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 RCBTB1Q8NDN9 531 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 COX14Q96I36 57 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 LYSMD1Q96S90 227 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 DNAJC7Q99615 494 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 FOXJ2Q9P0K8 574 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 PCDHB11Q9Y5F2 797 aa20.9■□□□□ 0.94
VSX1-206ENST00000444511 IGHV5-10-1A0A0J9YXX1 117 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 SSU72P8A0A1W2PR75 194 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 KCNK1O00180 336 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 HGSO14964 777 aaPredicted RBP20.89■□□□□ 0.93
VSX1-206ENST00000444511 EFSO43281 561 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 CBFA2T2O43439 604 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 AKR1B10O60218 316 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 PTMSP20962 102 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 ASTE1Q2TB18 679 aaPredicted RBP20.89■□□□□ 0.93
VSX1-206ENST00000444511 NKAIN2Q5VXU1 208 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 ZNF574Q6ZN55 896 aaPredicted RBP20.89■□□□□ 0.93
VSX1-206ENST00000444511 ZFAND4Q86XD8 727 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 CCHCR1Q8TD31 782 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.89■□□□□ 0.93
VSX1-206ENST00000444511 CCDC74BQ96LY2 380 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 MLPHQ9BV36 600 aaPredicted RBP20.89■□□□□ 0.93
VSX1-206ENST00000444511 ADGRE3Q9BY15 652 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 ZMYND15Q9H091 742 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 KCNK4Q9NYG8 393 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 PKD2L2Q9NZM6 624 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 VPS18Q9P253 973 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 ZNHIT2Q9UHR6 403 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 HEY1Q9Y5J3 304 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 UNC13CQ8NB66 2214 aa20.89■□□□□ 0.93
VSX1-206ENST00000444511 IGHV1OR21-1A0A087WYE8 117 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 C9orf172C9J069 976 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 ATP1A1P05023 1023 aaKnown RBP20.88■□□□□ 0.93
VSX1-206ENST00000444511 TPM1P09493 284 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 CCL4P13236 92 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 PLA2G2AP14555 144 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 CD82P27701 267 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 SPINT3P49223 89 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 PPM1FP49593 454 aaPredicted RBP20.88■□□□□ 0.93
VSX1-206ENST00000444511 PPIDQ08752 370 aaKnown RBP20.88■□□□□ 0.93
VSX1-206ENST00000444511 TRA2AQ13595 282 aaKnown RBP eCLIP20.88■□□□□ 0.93
VSX1-206ENST00000444511 QPCTQ16769 361 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 MANEAQ5SRI9 462 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 OR4D9Q8NGE8 314 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 SLC35G2Q8TBE7 412 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 DPYSL5Q9BPU6 564 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 MAK16Q9BXY0 300 aaKnown RBP20.88■□□□□ 0.93
VSX1-206ENST00000444511 SEMA4CQ9C0C4 833 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 B3GNT4Q9C0J1 378 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 FAM83DQ9H4H8 585 aa20.88■□□□□ 0.93
VSX1-206ENST00000444511 TRBV23OR9-2A0A075B6M9 112 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 ANKRD66B4E2M5 251 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 MMP2P08253 660 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 LIMK2P53671 638 aa20.87■□□□□ 0.93
VSX1-206ENST00000444511 IFI35P80217 286 aaPredicted RBP20.87■□□□□ 0.93
VSX1-206ENST00000444511 AP1B1Q10567 949 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms