RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 AGAP2Q99490 1192 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 CCDC3Q9BQI4 270 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 FSD1LQ9BXM9 530 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 FRMD8Q9BZ67 464 aaPredicted RBP11.15□□□□□ -0.62
RFFL-204ENST00000414419 NRSN2Q9GZP1 204 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 CDH19Q9H159 772 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 TRNAU1APQ9NX07 287 aaKnown RBP11.15□□□□□ -0.62
RFFL-204ENST00000414419 TRIM10Q9UDY6 481 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 RSPH14Q9UHP6 348 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 SHOC2Q9UQ13 582 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 SLC17A4Q9Y2C5 497 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 TMEM98Q9Y2Y6 226 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 ZNF711Q9Y462 761 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 KIF26BQ2KJY2 2108 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 SRRM3A6NNA2 597 aaPredicted RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 B4DGG1 531 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 F5H423 210 aaPredicted RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 KRT86O43790 486 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 NRDCO43847 1150 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 CSO75390 466 aaKnown RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 TCEA3O75764 348 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 ZNF189O75820 626 aaPredicted RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 ANXA9O76027 345 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 FTCDO95954 541 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 SOD1P00441 154 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 EPOP01588 193 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 IVLP07476 585 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 RBP3P10745 1247 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 PYGMP11217 842 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 RBL1P28749 1068 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 CD68P34810 354 aaPredicted RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 WNT3AP56704 352 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 EIF3EP60228 445 aaKnown RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 MPP3Q13368 585 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 SPIDRQ14159 915 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 PRPSAP1Q14558 356 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 PERM1Q5SV97 790 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 HENMT1Q5T8I9 393 aaKnown RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 CDCP2Q5VXM1 449 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 ALS2CLQ60I27 953 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 MARK2Q7KZI7 788 aaKnown RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 TRIM74Q86UV6 250 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 GALNT13Q8IUC8 556 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 RNF10Q8N5U6 811 aaKnown RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 TTC13Q8NBP0 860 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 CCDC112Q8NEF3 446 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 IPMKQ8NFU5 416 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 CCL4L1Q8NHW4 92 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 ALG3Q92685 438 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 TADA1Q96BN2 335 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 OR2M4Q96R27 311 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 ZSCAN5AQ9BUG6 496 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 SPATA16Q9BXB7 569 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 DKK4Q9UBT3 224 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
RFFL-204ENST00000414419 PACSIN2Q9UNF0 486 aaPredicted RBP11.14□□□□□ -0.63
RFFL-204ENST00000414419 ANKRD11Q6UB99 2663 aaPredicted RBP11.13□□□□□ -0.63
RFFL-204ENST00000414419 APC2O95996 2303 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 KCNN4O15554 427 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 ARHGAP6O43182 974 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 ZW10O43264 779 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 USP12O75317 370 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 SLC25A14O95258 325 aaPredicted RBP11.13□□□□□ -0.63
RFFL-204ENST00000414419 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
RFFL-204ENST00000414419 GLB1P16278 677 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 ADCY8P40145 1251 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 GEMP55040 296 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 CTBSQ01459 385 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 C14orf28Q4W4Y0 310 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 OGFOD3Q6PK18 319 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 RBM44Q6ZP01 1051 aaKnown RBP11.13□□□□□ -0.63
RFFL-204ENST00000414419 TMC3Q7Z5M5 1100 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 SLC25A41Q8N5S1 370 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 GPR156Q8NFN8 814 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 ZDHHC1Q8WTX9 485 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 UBE2Q2Q8WVN8 375 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 LRRC45Q96CN5 670 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 GRAMD1AQ96CP6 724 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 COX14Q96I36 57 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 TRABDQ9H4I3 376 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 C10orf88Q9H8K7 445 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 HACD3Q9P035 362 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 TAAR2Q9P1P5 351 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 VPS18Q9P253 973 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 LRIT1Q9P2V4 623 aa11.13□□□□□ -0.63
RFFL-204ENST00000414419 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
RFFL-204ENST00000414419 SCN8AQ9UQD0 1980 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 LOC285095A0A1B0GVY8 99 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 RHPN2P1A8MT19 583 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 FADS2P1A8MWK0 482 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 KRT37O76014 449 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 FUCA1P04066 466 aa11.12□□□□□ -0.63
RFFL-204ENST00000414419 CAPNS1P04632 268 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms