RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CSRP3P50461 194 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 WDR4P57081 412 aaKnown RBP12.04□□□□□ -0.48
USF1-203ENST00000368021 MRPS35P82673 323 aaKnown RBP12.04□□□□□ -0.48
USF1-203ENST00000368021 MPP1Q00013 466 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 IL9RQ01113 521 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 KDSRQ06136 332 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 BLMHQ13867 455 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 PTPRCAPQ14761 206 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 MLF2Q15773 248 aaPredicted RBP12.04□□□□□ -0.48
USF1-203ENST00000368021 CDKN3Q16667 212 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 INSCQ1MX18 579 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 HNRNPA1L2Q32P51 320 aaKnown RBP12.04□□□□□ -0.48
USF1-203ENST00000368021 C6orf89Q6UWU4 347 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 TPRG1Q6ZUI0 275 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 PAF1Q8N7H5 531 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 MGARPQ8TDB4 240 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 DYDC1Q8WWB3 177 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 CHFRQ96EP1 664 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 SMIM14Q96QK8 99 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 TCF12Q99081 682 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 GPR63Q9BZJ6 419 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 FOXQ1Q9C009 403 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 CATSPERZQ9NTU4 200 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 POLR3BQ9NW08 1133 aaPredicted RBP12.04□□□□□ -0.48
USF1-203ENST00000368021 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 IL36AQ9UHA7 158 aa12.04□□□□□ -0.48
USF1-203ENST00000368021 MTO1Q9Y2Z2 717 aaKnown RBP12.04□□□□□ -0.48
USF1-203ENST00000368021 C1orf232A0A0U1RR37 186 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 EDDM13A0A1B0GTR0 161 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 PRR33A8MZF0 331 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 CCL22O00626 93 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 PI15O43692 258 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 KAT7O95251 611 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 S1PR4O95977 384 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 MPOP05164 745 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 CTPS1P17812 591 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 NFKBIAP25963 317 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 HNF1BP35680 557 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 ETV4P43268 484 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 CLCN5P51795 746 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 CCNG1P51959 295 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 TMPRSS15P98073 1019 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 PPARDQ03181 441 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
USF1-203ENST00000368021 LRRC14Q15048 493 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 E2F5Q15329 346 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 SEPT7Q16181 437 aaKnown RBP12.03□□□□□ -0.48
USF1-203ENST00000368021 SH2D4BQ5SQS7 431 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 RNF187Q5TA31 235 aaPredicted RBP12.03□□□□□ -0.48
USF1-203ENST00000368021 LYSMD3Q7Z3D4 306 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 CKAP2Q8WWK9 683 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 EID2BQ96D98 161 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 ATXN7L3BQ96GX2 97 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 TMEM245Q9H330 911 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 TBC1D17Q9HA65 648 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 PCMTD2Q9NV79 361 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 MARCH4Q9P2E8 410 aaPredicted RBP12.03□□□□□ -0.48
USF1-203ENST00000368021 DCDC2Q9UHG0 476 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
USF1-203ENST00000368021 PLLPQ9Y342 182 aa12.03□□□□□ -0.48
USF1-203ENST00000368021 MTF2Q9Y483 593 aaPredicted RBP12.03□□□□□ -0.48
USF1-203ENST00000368021 OR51F1A6NGY5 319 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 GLRA3O75311 464 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 LEFTY1O75610 366 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 HAUS5O94927 633 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 STC1P52823 247 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 PTPN5P54829 565 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 POU4F1Q01851 419 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 ZNF234Q14588 700 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 FNDC3BQ53EP0 1204 aaKnown RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 FASTKD1Q53R41 847 aaKnown RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 LVRNQ6Q4G3 990 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 LCA5Q86VQ0 697 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 CBARPQ8N350 705 aaPredicted RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 GRIN3AQ8TCU5 1115 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 ZNF473Q8WTR7 871 aaKnown RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 DNASE1L2Q92874 299 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 KLHL32Q96NJ5 620 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 SLC13A1Q9BZW2 595 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 TRPV5Q9NQA5 729 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 FBXO6Q9NRD1 293 aaPredicted RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 INTS10Q9NVR2 710 aaKnown RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 THAP10Q9P2Z0 257 aaPredicted RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 FKBPLQ9UIM3 349 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 SLC39A10Q9ULF5 831 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 GRID1Q9ULK0 1009 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 NDRG2Q9UN36 371 aaKnown RBP12.02□□□□□ -0.48
USF1-203ENST00000368021 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 STARD13Q9Y3M8 1113 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 TICRRQ7Z2Z1 1910 aa12.02□□□□□ -0.48
USF1-203ENST00000368021 SCN8AQ9UQD0 1980 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 FRYLO94915 3013 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 FAM95CA0A1B0GW59 222 aa12.02□□□□□ -0.49
USF1-203ENST00000368021 NPIPB15A6NHN6 443 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms