RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RPLP0P05388 317 aaKnown RBP16.95■□□□□ 0.3
BRCC3-202ENST00000340647 PIRTP0C851 137 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 GOLGA6DP0CG33 693 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 PNLIPP16233 465 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 EPHB1P54762 984 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 ZFP36L1Q07352 338 aaKnown RBP16.95■□□□□ 0.3
BRCC3-202ENST00000340647 CCDC173Q0VFZ6 552 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 SPIDRQ14159 915 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 NR1D2Q14995 579 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 PDK1Q15118 436 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 TEX44Q53QW1 395 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 DOK6Q6PKX4 331 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 LYSMD3Q7Z3D4 306 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 RAVER1Q8IY67 606 aaKnown RBP16.95■□□□□ 0.3
BRCC3-202ENST00000340647 Q8N9G6 341 aaPredicted RBP16.95■□□□□ 0.3
BRCC3-202ENST00000340647 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 GRAMD1AQ96CP6 724 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 SLC25A51Q9H1U9 297 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 DPEP2Q9H4A9 486 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 DDX56Q9NY93 547 aaKnown RBP16.95■□□□□ 0.3
BRCC3-202ENST00000340647 GOLGA6AQ9NYA3 693 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 LRIT1Q9P2V4 623 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 DUSP10Q9Y6W6 482 aa16.95■□□□□ 0.3
BRCC3-202ENST00000340647 hCG_1818297A0A087WSY0 165 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 C1orf232A0A0U1RR37 186 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 SOWAHDA6NJG2 315 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 PPM1DO15297 605 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 INPP4BO15327 924 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 PSTPIP1O43586 416 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 NUDT21O43809 227 aaKnown RBP16.94■□□□□ 0.3
BRCC3-202ENST00000340647 CST8O60676 142 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ECEL1O95672 775 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ATP1A1P05023 1023 aaKnown RBP16.94■□□□□ 0.3
BRCC3-202ENST00000340647 NFKBIAP25963 317 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ABCG1P45844 678 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ERVPABLB-1P60509 514 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 SLC30A9Q6PML9 568 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF574Q6ZN55 896 aaPredicted RBP16.94■□□□□ 0.3
BRCC3-202ENST00000340647 KDELC2Q7Z4H8 507 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 NT5DC3Q86UY8 548 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 CCNJLQ8IV13 435 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 NDUFAF2Q8N183 169 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ARL14Q8N4G2 192 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ZDHHC1Q8WTX9 485 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 LIN37Q96GY3 246 aaPredicted RBP16.94■□□□□ 0.3
BRCC3-202ENST00000340647 TEKT5Q96M29 485 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 MLPHQ9BV36 600 aaPredicted RBP16.94■□□□□ 0.3
BRCC3-202ENST00000340647 GLOD4Q9HC38 313 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 SPO11Q9Y5K1 396 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 AHCTF1Q8WYP5 2266 aa16.94■□□□□ 0.3
BRCC3-202ENST00000340647 ASH1LQ9NR48 2969 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF106Q9H2Y7 1883 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 A0A0A6YYK5 440 aaPredicted RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 AURKAO14965 403 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 SPOPO43791 374 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 PRB1P04280 392 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 HGFP14210 728 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 ZFXP17010 805 aaPredicted RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 CCKBRP32239 447 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 CFHR1Q03591 330 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 KDELC1Q6UW63 502 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 MARK2Q7KZI7 788 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 TMC3Q7Z5M5 1100 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 SLITRK4Q8IW52 837 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 KATNAL2Q8IYT4 538 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 LSMEM2Q8N112 164 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 GPR26Q8NDV2 337 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 OR6C4Q8NGE1 309 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 EXD1Q8NHP7 514 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 WDR36Q8NI36 951 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 NAF1Q96HR8 494 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 MRFAP1L1Q96HT8 127 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF830Q96NB3 372 aaPredicted RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 GFM1Q96RP9 751 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 MAK16Q9BXY0 300 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 GSDMCQ9BYG8 508 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 LACRTQ9GZZ8 138 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 SEPT10Q9P0V9 454 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 TMPRSS11EQ9UL52 423 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 PRKAB1Q9Y478 270 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 ADGRG1Q9Y653 693 aa16.93■□□□□ 0.3
BRCC3-202ENST00000340647 FLNBO75369 2602 aaKnown RBP16.93■□□□□ 0.3
BRCC3-202ENST00000340647 CCDC187A0A096LP49 1063 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 A0A0U1RQJ8 604 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
BRCC3-202ENST00000340647 NR2C2P49116 596 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 OR1D5P58170 312 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 NOMO1Q15155 1222 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 SLC14A2Q15849 920 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF648Q5T619 568 aaPredicted RBP16.92■□□□□ 0.3
BRCC3-202ENST00000340647 KAZNQ674X7 775 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 C11orf63Q6NUN7 778 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 PCSK4Q6UW60 755 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 TMEM139Q8IV31 216 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF248Q8NDW4 579 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 OR2M4Q96R27 311 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms