RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 XAGE5Q8WWM1 108 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 PLEKHA6Q9Y2H5 1048 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 RBL1P28749 1068 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 TTPAP49638 278 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF554Q86TJ5 538 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 DEFB106AQ8N104 65 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 SFRP1Q8N474 314 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ANKRD7Q92527 254 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 NXPE2Q96DL1 559 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 TBX5Q99593 518 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF649Q9BS31 505 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 NOL11Q9H8H0 719 aaKnown RBP16.36■□□□□ 0.21
PTCH1-201ENST00000331920 SPON1Q9HCB6 807 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF878C9JN71 531 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 CCNCP24863 283 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ICAM3P32942 547 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 TTKP33981 857 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 KCNJ5P48544 419 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 CERCAMQ5T4B2 595 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ADAMTS15Q8TE58 950 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 MSRAQ9UJ68 235 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 PCDHGC5Q9Y5F6 944 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 TFEBP19484 476 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF782Q6ZMW2 699 aaPredicted RBP16.36■□□□□ 0.21
PTCH1-201ENST00000331920 SLC39A8Q9C0K1 460 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ERVK-18Q9QC07 812 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 LAMC1P11047 1609 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 PIAS1O75925 651 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF823P16415 610 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ATP5C1P36542 298 aaKnown RBP16.36■□□□□ 0.21
PTCH1-201ENST00000331920 SMARCB1Q12824 385 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 CHSY3Q70JA7 882 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 TMC8Q8IU68 726 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 OVCA2Q8WZ82 227 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ALG2Q9H553 416 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 DMTF1Q9Y222 760 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 PCDHGB5Q9Y5G0 923 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ELFN1P0C7U0 828 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 PSMA1P25786 263 aaKnown RBP16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ALX1Q15699 326 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 THAP5Q7Z6K1 395 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 GPR180Q86V85 440 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 PHYKPLQ8IUZ5 450 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 TMEM27Q9HBJ8 222 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 HCN3Q9P1Z3 774 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 RPTORQ8N122 1335 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 ZSCAN5DPP0CG00 497 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 MAGEA11P43364 429 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ANXA8L1Q5VT79 327 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 RALGPS2Q86X27 583 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 FBXO15Q8NCQ5 510 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 BRD7Q9NPI1 651 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ERVK-11Q9UQG0 969 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 IQCF5A8MTL0 148 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PAPSS2O95340 614 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 YAP1P46937 504 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 MAXP61244 160 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 BNIP1Q12981 228 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 LARS2Q15031 903 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 CA9Q16790 459 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF571Q7Z3V5 609 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 P4HA3Q7Z4N8 544 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 SYVN1Q86TM6 617 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PRSS58Q8IYP2 241 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 NPEPPSL1A6NEC2 478 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 FGBP02675 491 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 HERVK_113P62684 666 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 RAB12Q6IQ22 244 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 IGDCC4Q8TDY8 1250 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 SLC30A4O14863 429 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ICAM1P05362 532 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PGRP06401 933 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PECAM1P16284 738 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 SLC5A9Q2M3M2 681 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ALYREFQ86V81 257 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 SPAG16Q8N0X2 631 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 CD300LFQ8TDQ1 290 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 LENG9Q96B70 501 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 TCF25Q9BQ70 676 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 C2orf49Q9BVC5 232 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 CYP11B2P19099 503 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ITPKAP23677 461 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ADRA1DP25100 572 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ZMIZ2Q8NF64 920 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 OR6K6Q8NGW6 343 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 GTPBP3Q969Y2 492 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ETNK2Q9NVF9 386 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 COPS7AQ9UBW8 275 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PCDHGA10Q9Y5H3 936 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 CACNB4O00305 520 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ARP10275 920 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 POU2F1P14859 743 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PNPLA3Q9NST1 481 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 KCNK4Q9NYG8 393 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 MTHFD1P11586 935 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PSEN2P49810 448 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 OLR1P78380 273 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms