RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KCTD8Q6ZWB6 473 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 PPP1R14AQ96A00 147 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 PPM1HQ9ULR3 514 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 GTF2E2P29084 291 aaKnown RBP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 DLG1Q12959 904 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 SGCGQ13326 291 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 GPR158Q5T848 1215 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 LCLAT1Q6UWP7 414 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 ZDHHC24Q6UX98 284 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 STRADAQ7RTN6 431 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 FAM35AQ86V20 835 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 KCTD15Q96SI1 283 aaPredicted RBP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 PCDHGA10Q9Y5H3 936 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 BMP10O95393 424 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 NR2F1P10589 423 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 AKR1A1P14550 325 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 MPP1Q00013 466 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 ABRQ12979 859 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 IQSEC1Q6DN90 963 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 GATA5Q9BWX5 397 aaPredicted RBP16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 ZNF224Q9NZL3 707 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 PCDHB9Q9Y5E1 797 aa16.42■□□□□ 0.22
SH3RF1-201ENST00000284637 NPEPPSL1A6NEC2 478 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 CHRNB2P17787 502 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 QRFPRQ96P65 431 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 SSR3Q9UNL2 185 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC27A5Q9Y2P5 690 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 E7ENX8 843 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 NDUFB5O43674 189 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 LRIG2O94898 1065 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PRG2P13727 222 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 GDF10P55107 478 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 CCNYL2Q5T2Q4 361 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 FAM151BQ6UXP7 276 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PRR23BQ6ZRT6 265 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 C15orf52Q6ZUT6 534 aaKnown RBP16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PTCHD4Q6ZW05 846 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PLPPR4Q7Z2D5 763 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 BANPQ8N9N5 519 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 FNDC8Q8TC99 324 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 ATL1Q8WXF7 558 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PAGE1O75459 146 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 FGF1P05230 155 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PORP16435 677 aaPredicted RBP16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 CMPK2Q5EBM0 449 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 POMGNT2Q8NAT1 580 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 GPR152Q8TDT2 470 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 CCRL2O00421 344 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 TSPAN4O14817 238 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 MSI1O43347 362 aaKnown RBP16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 RPN2P04844 631 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 RCVRNP35243 200 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 IDH3AP50213 366 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 BCAP31P51572 246 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 PTP4A2Q12974 167 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 VGLL4Q14135 290 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 HECTD3Q5T447 861 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 C9orf131Q5VYM1 1079 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 FBXL19Q6PCT2 694 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 LRRC52Q8N7C0 313 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 KIFC1Q9BW19 673 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 SDCBP2Q9H190 292 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 NXF3Q9H4D5 531 aaKnown RBP16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 GOLGA2P5Q9HBQ8 144 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 C12orf4Q9NQ89 552 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 STON1Q9Y6Q2 735 aa16.41■□□□□ 0.22
SH3RF1-201ENST00000284637 CILPO75339 1184 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 POLR2JP52435 117 aaKnown RBP16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 PRAMEF19Q5SWL8 479 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 RHBDF2Q6PJF5 856 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 DEF8Q6ZN54 512 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 PDSS2Q86YH6 399 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 CNTD1Q8N815 330 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 TWIST2Q8WVJ9 160 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 AZIN2Q96A70 460 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC38A2Q96QD8 506 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 TSPAN18Q96SJ8 248 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 ADI1Q9BV57 179 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 NFKBIL1Q9UBC1 381 aaPredicted RBP16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 DNMT3LQ9UJW3 386 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 AGO1Q9UL18 857 aaKnown RBP16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 VPS4AQ9UN37 437 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 POLR1DQ9Y2S0 133 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 SMIM10L2AP0DMW4 78 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 SMIM10L2BP0DMW5 78 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 STAT5AP42229 794 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 RPS9P46781 194 aaKnown RBP16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 LIMK2P53671 638 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 UGT2B15P54855 530 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 LIPEQ05469 1076 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 GPAT3Q53EU6 434 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 CXCL17Q6UXB2 119 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 SLC34A3Q8N130 599 aa16.4■□□□□ 0.22
SH3RF1-201ENST00000284637 OR52L1Q8NGH7 329 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms