RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CDH17Q12864 832 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 BTBD8Q5XKL5 378 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 IFNEQ86WN2 208 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 TRIB2Q92519 343 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 MUC13Q9H3R2 512 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 GSTO2Q9H4Y5 243 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 AKTIPQ9H8T0 292 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 CDHR5Q9HBB8 845 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 CHST12Q9NRB3 414 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 SYNJ2BP-COX16A0A087WUM0 186 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 AXIN1O15169 862 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 C22orf31O95567 290 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 BMP4P12644 408 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 PITX1P78337 314 aaPredicted RBP17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 GALNT1Q10472 559 aaPredicted RBP17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 LINC00299Q6ZSB3 139 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 KIAA0408Q6ZU52 694 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 DEFB106AQ8N104 65 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 OR6J1Q8NGC5 347 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 TMEM125Q96AQ2 219 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 PHF21BQ96EK2 531 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 DHRS1Q96LJ7 313 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 HPS4Q9NQG7 708 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 DPP3Q9NY33 737 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 COX16Q9P0S2 106 aa17.64■□□□□ 0.41
CDKN1B-201ENST00000228872 C16orf96A6NNT2 1141 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 STAU1O95793 577 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 IQCF3P0C7M6 154 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 UMPSP11172 480 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 TSPAN8P19075 237 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 MATKP42679 507 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 NEK2P51955 445 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 ARSFP54793 590 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 IFITM2Q01629 132 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 TNFAIP2Q03169 654 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 OTUD1Q5VV17 481 aaPredicted RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC22A16Q86VW1 577 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 RNF135Q8IUD6 432 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 ZCCHC7Q8N3Z6 543 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 NAT16Q8N8M0 369 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 HDAC2Q92769 488 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 ZMAT2Q96NC0 199 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 PPP1R16BQ96T49 567 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 THG1LQ9NWX6 298 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 BAG5Q9UL15 447 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SOX11P35716 441 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC1A2P43004 574 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 PIGFQ07326 219 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 DPY19L1Q2PZI1 675 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC25A52Q3SY17 297 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SPATS1Q496A3 300 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 PTRH1Q86Y79 214 aaKnown RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SCML4Q8N228 414 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 UBXN10Q96LJ8 280 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 SEPHS2Q99611 448 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 KCTD14Q9BQ13 255 aaPredicted RBP17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 BDH2Q9BUT1 245 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 ALG2Q9H553 416 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 POLE4Q9NR33 117 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 GIMAP2Q9UG22 337 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 V9GYQ6 96 aa17.63■□□□□ 0.41
CDKN1B-201ENST00000228872 PSMD11O00231 422 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 THRBP10828 461 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 INSRRP14616 1297 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 BDNFP23560 247 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ALDH3A2P51648 485 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 CLCQ05315 142 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 FOXM1Q08050 763 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 CAMK2BQ13554 666 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 IMPG1Q17R60 797 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 RABL3Q5HYI8 236 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 PKN3Q6P5Z2 889 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 MIER2Q8N344 545 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ATP6V0D2Q8N8Y2 350 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ZIC5Q96T25 663 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 IL12RB2Q99665 862 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 CHID1Q9BWS9 393 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 AURKAO14965 403 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ZNF286BP0CG31 522 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ERCC2P18074 760 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ARNTP27540 789 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 ADORA2BP29275 332 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC12A2P55011 1212 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 LIPEQ05469 1076 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 DAG1Q14118 895 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 MFSD4BQ5TF39 518 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 NAPEPLDQ6IQ20 393 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 TAF2Q6P1X5 1199 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 C8orf59Q8N0T1 100 aaPredicted RBP17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 PIK3C3Q8NEB9 887 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 HDAC11Q96DB2 347 aa17.62■□□□□ 0.41
CDKN1B-201ENST00000228872 TNPO2O14787 897 aaKnown RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 ALDH1A1P00352 501 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 APLP1P51693 650 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 TKTL1P51854 596 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 GP2P55259 537 aaKnown RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 ECT2LQ008S8 904 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 BST2Q10589 180 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms