RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 FAM199XQ6PEV8 388 aaPredicted RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 DOK6Q6PKX4 331 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 LIPIQ6XZB0 460 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 FAM183BPQ6ZVS7 135 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 MED25Q71SY5 747 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 TMEM102Q8N9M5 508 aaPredicted RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 NETO2Q8NC67 525 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 TM9SF4Q92544 642 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 C9orf72Q96LT7 481 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 ZNF396Q96N95 335 aaPredicted RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 OR2M4Q96R27 311 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 CPXM1Q96SM3 734 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 RUFY1Q96T51 708 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 BARD1Q99728 777 aaKnown RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 TEX101Q9BY14 249 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 FRMD8Q9BZ67 464 aaPredicted RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 UPF2Q9HAU5 1272 aaKnown RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 PDE7BQ9NP56 450 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 SARS2Q9NP81 518 aaKnown RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 GOLGA6AQ9NYA3 693 aa10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
PTP4A1-207ENST00000639568 PCSK5Q92824 1860 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 TSPAN11A1L157 253 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 A8MX80 341 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 TOX3O15405 576 aaPredicted RBP10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 MYL1P05976 194 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 IVLP07476 585 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 TFE3P19532 575 aaPredicted RBP10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 POLR2LP62875 67 aaKnown RBP10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC6A3Q01959 620 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 INO80DQ53TQ3 878 aaPredicted RBP10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 MIIPQ5JXC2 388 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 OLFML1Q6UWY5 402 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC26A9Q7LBE3 791 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC9B2Q86UD5 537 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 KCNMB4Q86W47 210 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 DNAAF5Q86Y56 855 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 ZADH2Q8N4Q0 377 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 ARFGAP1Q8N6T3 406 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 ZNF606Q8WXB4 792 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 NUS1Q96E22 293 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 SGSM3Q96HU1 749 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 EXOC2Q96KP1 924 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 TGM7Q96PF1 710 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 NPY6RQ99463 290 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC17A4Q9Y2C5 497 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 PLEKHM1Q9Y4G2 1056 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 CHD5Q8TDI0 1954 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 LRP4O75096 1905 aa10.92□□□□□ -0.66
PTP4A1-207ENST00000639568 MN1Q10571 1320 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 POLEQ07864 2286 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 PPP1R3GB7ZBB8 358 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC16A3O15427 465 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 YEATS4O95619 227 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 STSP08842 583 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 PRKCSHP14314 528 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 SYT1P21579 422 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 GNA15P30679 374 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ME1P48163 572 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 GFERP55789 205 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 CDK3Q00526 305 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 GCNT1Q02742 428 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 LRP8Q14114 963 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ZNF630Q2M218 657 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ZCWPW2Q504Y3 356 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 OTUD1Q5VV17 481 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ZNF517Q6ZMY9 492 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 BNC2Q6ZN30 1099 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 CAMK1DQ8IU85 385 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 PELI3Q8N2H9 469 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 PGAP3Q96FM1 320 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 GTPBP4Q9BZE4 634 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 RETREG1Q9H6L5 497 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 NDFIP2Q9NV92 336 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 KCTD5Q9NXV2 234 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 SUCOQ9UBS9 1254 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ARMCX3Q9UH62 379 aaPredicted RBP10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ZNHIT2Q9UHR6 403 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 SNX7Q9UNH6 387 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 NTNG1Q9Y2I2 539 aa10.91□□□□□ -0.66
PTP4A1-207ENST00000639568 ACTN4O43707 911 aaKnown RBP10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 KLHL41O60662 606 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 C9P02748 559 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 EDN3P14138 238 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC2A4P14672 509 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 RHOQP17081 205 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 SERPINA4P29622 427 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 FMO5P49326 533 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 VAV2P52735 878 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 RALGDSQ12967 914 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 ZNF235Q14590 738 aa10.9□□□□□ -0.66
PTP4A1-207ENST00000639568 SLC25A52Q3SY17 297 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms