RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 CBR4Q8N4T8 237 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ZMIZ2Q8NF64 920 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ADAMTS16Q8TE57 1224 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 RNF34Q969K3 372 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ISOC1Q96CN7 298 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ZNF689Q96CS4 500 aaPredicted RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 MTIF3Q9H2K0 278 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 GSTO2Q9H4Y5 243 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 SMOXQ9NWM0 555 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 GMPR2Q9P2T1 348 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 EBF1Q9UH73 591 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 MICAL3Q7RTP6 2002 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 DHRS12A0PJE2 317 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 SH3PXD2BA1X283 911 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 TBKBP1A7MCY6 615 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 UBFD1O14562 309 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 MAGEB3O15480 346 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ZSCAN9O15535 394 aaPredicted RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 PMPCBO75439 489 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 MT-CO1P00395 513 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 HNRNPCP07910 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
DDB1-224ENST00000545894 IMPDH1P20839 514 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 GPX3P22352 226 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 RPL10P27635 214 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 INPP5AQ14642 412 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 NOMO2Q5JPE7 1267 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 CLEC6AQ6EIG7 209 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 PRMT9Q6P2P2 845 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 CYHR1Q6ZMK1 362 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 FUNDC1Q8IVP5 155 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ARHGAP12Q8IWW6 846 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 FAM110BQ8TC76 370 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 PHOSPHO2Q8TCD6 241 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 CALML6Q8TD86 181 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 C19orf60Q96EN9 201 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ZNF419Q96HQ0 510 aaPredicted RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 PPP1R10Q96QC0 940 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 HOPXQ9BPY8 73 aaPredicted RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 GPATCH1Q9BRR8 931 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 ADI1Q9BV57 179 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 RC3H2Q9HBD1 1191 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 FBRSL1Q9HCM7 1045 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 AURKCQ9UQB9 309 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ZNF510Q9Y2H8 683 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 SHROOM3Q8TF72 1996 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ATP6AP2A0A1C7CYW4 349 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 NME4O00746 187 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 DLGAP1O14490 977 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 MATN3O15232 486 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 HOXA2O43364 376 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 ATP6AP2O75787 350 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 GJB5O95377 273 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 GNAO1P09471 354 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 IL10P22301 178 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 CHRNA4P43681 627 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 ENTPD1P49961 510 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 ATP6V0D1P61421 351 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 MERTKQ12866 999 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 SLC14A2Q15849 920 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 PAN2Q504Q3 1202 aaKnown RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 ZNF789Q5FWF6 425 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 ACBD5Q5T8D3 534 aaPredicted RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 FAM109BQ6ICB4 259 aaPredicted RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 RANBP10Q6VN20 620 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 TAC4Q86UU9 113 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 TRIM74Q86UV6 250 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 GABPB2Q8TAK5 448 aaPredicted RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 PCED1BQ96HM7 432 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 UBXN10Q96LJ8 280 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 C9orf16Q9BUW7 83 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 AGPAT4Q9NRZ5 378 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 TMEM30AQ9NV96 361 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 ABCD2Q9UBJ2 740 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 HCSTQ9UBK5 93 aa11.46□□□□□ -0.57
DDB1-224ENST00000545894 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 FNDC1Q4ZHG4 1894 aaPredicted RBP11.46□□□□□ -0.57
DDB1-224ENST00000545894 A0A0J9YYE9 177 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 MYBPHLA2RUH7 354 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 TRIM64A6NGJ6 449 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 GRXCR1A8MXD5 290 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 NR5A2O00482 541 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 MAFKO60675 156 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 SUPT7LO94864 414 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 THP07101 528 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 ALDOCP09972 364 aaKnown RBP11.46□□□□□ -0.58
DDB1-224ENST00000545894 FASP25445 335 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 PSMA4P25789 261 aaKnown RBP11.46□□□□□ -0.58
DDB1-224ENST00000545894 LEPRP48357 1165 aaKnown RBP11.46□□□□□ -0.58
DDB1-224ENST00000545894 BNIP2Q12982 314 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 KIF19Q2TAC6 998 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 KDELC2Q7Z4H8 507 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 ZNF280BQ86YH2 543 aa11.46□□□□□ -0.58
DDB1-224ENST00000545894 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms