RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 INSL6Q9Y581 213 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 MTMR11A4FU01 709 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 WDR47O94967 919 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 WDR4P57081 412 aaKnown RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 XKR6Q5GH73 641 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 ULK2Q8IYT8 1036 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 PTCD3Q96EY7 689 aaKnown RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 ADPRHL2Q9NX46 363 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 KLHL28Q9NXS3 571 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 ANAPC2Q9UJX6 822 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 MYH10P35580 1976 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 M0R3G1 203 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 DYRK3O43781 588 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 CDK14O94921 469 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 FAM58BPP0C7Q3 252 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 CLK1P49759 484 aaKnown RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 IRX1P78414 480 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF438Q7Z4V0 828 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 AADATQ8N5Z0 425 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 SLC24A3Q9HC58 644 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 COL22A1Q8NFW1 1626 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 NPEPPSL1A6NEC2 478 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 BMP10O95393 424 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 HAPLN1P10915 354 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 RXRGP48443 463 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 ATAT1Q5SQI0 421 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 FAM43BQ6ZT52 329 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 STK32CQ86UX6 486 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 MICU2Q8IYU8 434 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 TCAIMQ8N3R3 496 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 DCAKDQ8WVC6 231 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 BBS4Q96RK4 519 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 TBCDQ9BTW9 1192 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 CAPN10Q9HC96 672 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 INTS10Q9NVR2 710 aaKnown RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 FAM159BA6NKW6 160 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 C9IYK1 514 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 ENPP3O14638 875 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 MAPK9P45984 424 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
BRAT1-203ENST00000467558 PIGWQ7Z7B1 504 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 RELL1Q8IUW5 271 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
BRAT1-203ENST00000467558 CPA6Q8N4T0 437 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 TMEM40Q8WWA1 233 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 RTKNQ9BST9 563 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 CXorf56Q9H5V9 222 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 FKBPLQ9UIM3 349 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
BRAT1-203ENST00000467558 ASF1AQ9Y294 204 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 SLC35G4P0C7Q5 338 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 SLC1A2P43004 574 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 ZDHHC13Q8IUH4 622 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 TMEM174Q8WUU8 243 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 SEC14L1Q92503 715 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 HEPHQ9BQS7 1158 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 C1orf50Q9BV19 199 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 NMUR1Q9HB89 426 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 CYTH4Q9UIA0 394 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 DNM1LO00429 736 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 CLOCKO15516 846 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 STK16O75716 305 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 HTR1BP28222 390 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 RPL3P39023 403 aaKnown RBP13.75□□□□□ -0.21
BRAT1-203ENST00000467558 GRIA3P42263 894 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 RFX3P48380 749 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 APLP1P51693 650 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 KCNQ1P51787 676 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 GPX6P59796 221 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 CYP4F8P98187 520 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 KIAA1324Q6UXG2 1013 aaKnown RBP13.75□□□□□ -0.21
BRAT1-203ENST00000467558 ZBTB2Q8N680 514 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 ARHGAP39Q9C0H5 1083 aa13.75□□□□□ -0.21
BRAT1-203ENST00000467558 MYH8P13535 1937 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 A0A088AWK7 358 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 A0A1W2PRU2 124 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 GSC2O15499 205 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 NRP2O60462 931 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 UGT1A9O60656 530 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 IQCF3P0C7M6 154 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF10P21506 573 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-203ENST00000467558 LCP2Q13094 533 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 ATAD3BQ5T9A4 648 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 CTU1Q7Z7A3 348 aaKnown RBP13.74□□□□□ -0.21
BRAT1-203ENST00000467558 GPR180Q86V85 440 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 TRIM69Q86WT6 500 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 SKA1Q96BD8 255 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 RPL10LQ96L21 214 aaKnown RBP13.74□□□□□ -0.21
BRAT1-203ENST00000467558 UGT1A7Q9HAW7 530 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 UGT1A10Q9HAW8 530 aa13.74□□□□□ -0.21
BRAT1-203ENST00000467558 UGT1A8Q9HAW9 530 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms