RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	TDRD1	Q9BXT4	1180 aa	Known RBP	12.71	□□□□□ -0.37
FDPS-204	ENST00000461507	ADGRE3	Q9BY15	652 aa		12.71	□□□□□ -0.37
FDPS-204	ENST00000461507	CLPB	Q9H078	707 aa		12.71	□□□□□ -0.37
FDPS-204	ENST00000461507	PRORY	Q9H606	182 aa		12.71	□□□□□ -0.37
FDPS-204	ENST00000461507	GLOD4	Q9HC38	313 aa		12.71	□□□□□ -0.37
FDPS-204	ENST00000461507	TRMT1	Q9NXH9	659 aa	Known RBP	12.71	□□□□□ -0.37
FDPS-204	ENST00000461507	KIF26B	Q2KJY2	2108 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	NPIPB15	A6NHN6	443 aa	Predicted RBP	12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	TCEA3	O75764	348 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	RECQL5	O94762	991 aa	Predicted RBP	12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	MT-CYB	P00156	380 aa	Predicted RBP	12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	ITPKB	P27987	946 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	LSS	P48449	732 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	BLK	P51451	505 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	HK3	P52790	923 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	SKOR1	P84550	965 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	PPARD	Q03181	441 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	MTM1	Q13496	603 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	NR0B2	Q15466	257 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	CNGA3	Q16281	694 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	CDKN3	Q16667	212 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	ISX	Q2M1V0	245 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	PRRT3	Q5FWE3	981 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	LVRN	Q6Q4G3	990 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	LIPI	Q6XZB0	460 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	EFL1	Q7Z2Z2	1120 aa	Known RBP	12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	TSPAN33	Q86UF1	283 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	LSMEM2	Q8N112	164 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	SDR16C5	Q8N3Y7	309 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	TTC13	Q8NBP0	860 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	NAT6	Q93015	286 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	NUS1	Q96E22	293 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	CRELD1	Q96HD1	420 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	HIC2	Q96JB3	615 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	ZNF578	Q96N58	590 aa	Predicted RBP	12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	DCBLD2	Q96PD2	775 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	BBC3	Q96PG8	261 aa	Predicted RBP	12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	SMIM14	Q96QK8	99 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	SLC13A1	Q9BZW2	595 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	SLC25A51	Q9H1U9	297 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	KCNF1	Q9H3M0	494 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	MOSPD1	Q9UJG1	213 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	EFR3B	Q9Y2G0	817 aa		12.7	□□□□□ -0.38
FDPS-204	ENST00000461507	LOC400499	M0QZD8	3231 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507		A0A0U1RQS6	177 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	YY2	O15391	372 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	RRP8	O43159	456 aa	Known RBP	12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	HEXIM1	O94992	359 aa	Known RBP	12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	RASGRP1	O95267	797 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	ANXA6	P08133	673 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	PIRT	P0C851	137 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	TSHR	P16473	764 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	GM2A	P17900	193 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	RPIA	P49247	311 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	KIAA1024L	P59773	190 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	WASHC5	Q12768	1159 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	XRCC4	Q13426	336 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	PRPSAP1	Q14558	356 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	TCEA2	Q15560	299 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	ALG11	Q2TAA5	492 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	PERM1	Q5SV97	790 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	MEI1	Q5TIA1	1274 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	LRRC66	Q68CR7	880 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	ALG1L	Q6GMV1	187 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	ITPRIPL1	Q6GPH6	555 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	LRRC69	Q6ZNQ3	347 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	ZNF567	Q8N184	647 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	TAB3	Q8N5C8	712 aa	Predicted RBP	12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	IPMK	Q8NFU5	416 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	WDR48	Q8TAF3	677 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	GLMN	Q92990	594 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	IMP4	Q96G21	291 aa	Known RBP	12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	TEKT5	Q96M29	485 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	VAT1	Q99536	393 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	APOO	Q9BUR5	198 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	MLPH	Q9BV36	600 aa	Predicted RBP	12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	FSD1L	Q9BXM9	530 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	POLR1B	Q9H9Y6	1135 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	ASCL3	Q9NQ33	180 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	CD84	Q9UIB8	345 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	OR1A2	Q9Y585	309 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507	DGKB	Q9Y6T7	804 aa		12.69	□□□□□ -0.38
FDPS-204	ENST00000461507		A0A0J9YYE9	177 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	C1orf232	A0A0U1RR37	186 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507		A0A1W2PNU3	283 aa	Predicted RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	TCRBV7S2A1N4T	A0A589	114 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CPED1	A4D0V7	1026 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CAPN8	A6NHC0	703 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CEP104	O60308	925 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	USP12	O75317	370 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	TRBC1	P01850	177 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CELA2B	P08218	269 aa	Predicted RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	MMP2	P08253	660 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	HOXC4	P09017	264 aa	Predicted RBP	12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	LHCGR	P22888	699 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	CXCR5	P32302	372 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	ETV3	P41162	512 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	PDX1	P52945	283 aa		12.68	□□□□□ -0.38
FDPS-204	ENST00000461507	PCBP4	P57723	403 aa	Known RBP	12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms