RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IGSF5Q9NSI5 407 aa17.11■□□□□ 0.33
UBE2D4-209ENST00000454428 PCYT1BQ9Y5K3 369 aaPredicted RBP17.11■□□□□ 0.33
UBE2D4-209ENST00000454428 OTOGQ6ZRI0 2925 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 TTC24A2A3L6 582 aaPredicted RBP17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 F8VZ95 297 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 CCP110O43303 1012 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 PALMO75781 387 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 MAP3K6O95382 1288 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 TNFAIP3P21580 790 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 TEAD1P28347 426 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 ERCC5P28715 1186 aaPredicted RBP17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 DLSTP36957 453 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 MTIF2P46199 727 aaKnown RBP17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 ERV3-1Q14264 604 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 PYCR3Q53H96 274 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 DOK6Q6PKX4 331 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 ARHGAP36Q6ZRI8 547 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 ARHGAP12Q8IWW6 846 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 FNIP1Q8TF40 1166 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 AHCYL2Q96HN2 611 aaKnown RBP17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 OR2M4Q96R27 311 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 ZMYND15Q9H091 742 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 CUEDC1Q9NWM3 386 aaPredicted RBP17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 CROTQ9UKG9 612 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 TMEM98Q9Y2Y6 226 aa17.1■□□□□ 0.33
UBE2D4-209ENST00000454428 TTLL8A6PVC2 850 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 POLR1CO15160 346 aaPredicted RBP17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 HTRA2O43464 458 aaPredicted RBP17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 RFPL1O75677 317 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 DNAJB5O75953 348 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 KRT3P12035 628 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 UCHL3P15374 230 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 GPD1P21695 349 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 VIPR1P32241 457 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 MAN1A1P33908 653 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 DCTP40126 519 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 NDST2P52849 883 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 PMS2P54278 862 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 GSCP56915 257 aaPredicted RBP17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 DENND2CQ68D51 928 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 RAET1GQ6H3X3 334 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 RFLNAQ6ZTI6 216 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 Q6ZVL8 140 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 NCSTNQ92542 709 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 POLHQ9Y253 713 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 MAP4K5Q9Y4K4 846 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 CSMD2Q7Z408 3487 aa17.09■□□□□ 0.33
UBE2D4-209ENST00000454428 A0A0U1RQS6 177 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 FGF10O15520 208 aaPredicted RBP17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 CLDN1O95832 211 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 SCNN1BP51168 640 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 PEX6Q13608 980 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 SCYL2Q6P3W7 929 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 TECPR1Q7Z6L1 1165 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 TRIM74Q86UV6 250 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 PCDHB18PQ96TA0 734 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 CINPQ9BW66 212 aaPredicted RBP17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 KLHL3Q9UH77 587 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 PCDHGC4Q9Y5F7 938 aa17.08■□□□□ 0.32
UBE2D4-209ENST00000454428 NPIPB15A6NHN6 443 aaPredicted RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 SORBS2O94875 1100 aaKnown RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 UNGP13051 313 aaPredicted RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 AP1S1P61966 158 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 CDR2Q01850 454 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 HHEXQ03014 270 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 NFATC2Q13469 925 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 NADK2Q4G0N4 442 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 VWA3BQ502W6 1294 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 MARK2Q7KZI7 788 aaKnown RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 TSPAN33Q86UF1 283 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 ZNF677Q86XU0 584 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 TICAM1Q8IUC6 712 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 APLFQ8IW19 511 aaPredicted RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 FAM114A1Q8IWE2 563 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 NPWQ8N729 165 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 EFCAB3Q8N7B9 438 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 GALNT6Q8NCL4 622 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 PSKH2Q96QS6 385 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 STK33Q9BYT3 514 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 ULBP3Q9BZM4 244 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 SARS2Q9NP81 518 aaKnown RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 GPATCH2LQ9NWQ4 482 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 PCDHB3Q9Y5E6 796 aa17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 OAS3Q9Y6K5 1087 aaKnown RBP17.07■□□□□ 0.32
UBE2D4-209ENST00000454428 AKAP9Q99996 3911 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 MN1Q10571 1320 aaPredicted RBP17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 CDC14CA4D256 554 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 A6NCN8 305 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 GOLGA6CA6NDK9 693 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 GOLGA6BA6NDN3 693 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 ANKRD34CP0C6C1 535 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 GOLGA6DP0CG33 693 aa17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 POU3F2P20265 443 aaPredicted RBP17.06■□□□□ 0.32
UBE2D4-209ENST00000454428 TPI1P60174 286 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms