RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 MYH13Q9UKX3 1938 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 GAGE12JA6NER3 117 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 LRRC53A6NM62 1247 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 A6NNC1 897 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 USP27XA6NNY8 438 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZNF814B7Z6K7 855 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 HSPB6O14558 160 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 MAP2K7O14733 419 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 KIF5CO60282 957 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 SHOX2O60902 331 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 PPFIA2O75334 1257 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 TIPRLO75663 272 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 SEC31AO94979 1220 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 LDHCP07864 332 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 MMP3P08254 477 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 PCNAP12004 261 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 PSMA5P28066 241 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 GJB2P29033 226 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 HNRNPH1P31943 449 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 RYKP34925 604 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 HSPA4P34932 840 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 OLR1P78380 273 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 CKAP4Q07065 602 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 TMEM115Q12893 351 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 MTX1Q13505 466 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 RNPS1Q15287 305 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 INPP5JQ15735 1006 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 EZH2Q15910 746 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 SNCBQ16143 134 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 SRSF7Q16629 238 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 WHAMMP3Q1A5X7 153 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 Q4G0T1 1027 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 KLHL24Q6TFL4 600 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 FASTKD5Q7L8L6 764 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 ARMC9Q7Z3E5 817 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 TBC1D26Q86UD7 250 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 DNAJC10Q8IXB1 793 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM217AQ8IXS0 508 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 HORMAD2Q8N7B1 307 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 MSANTD4Q8NCY6 345 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 MPLKIPQ8TAP9 179 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 NEK9Q8TD19 979 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 CREB3L4Q8TEY5 395 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 TCP11Q8WWU5 503 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 P3H4Q92791 437 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM149B1Q96BN6 582 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 RNF183Q96D59 192 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 RPGRIP1Q96KN7 1286 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 CRAMP1Q96RY5 1269 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 THUMPD2Q9BTF0 503 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 TRMOQ9BU70 441 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 CARD6Q9BX69 1037 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 TEX13AQ9BXU3 409 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 ITPAQ9BY32 194 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 FUT8Q9BYC5 575 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 BICC1Q9H694 974 aaKnown RBP4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 EXOC6BQ9Y2D4 811 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 KCNE2Q9Y6J6 123 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 LRRC37A3O60309 1634 aa4.57□□□□□ -1.68
HMGB1P16-201ENST00000447155 KDRP35968 1356 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MON2Q7Z3U7 1717 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTAGE15A4D2H0 777 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 GOLGA8KD6RF30 607 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 HIP1O00291 1037 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MDM4O15151 490 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 DOK2O60496 412 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 ATG13O75143 517 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 PTP4A3O75365 173 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 HOXB5P09067 269 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC175P0C221 793 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTAGE8P0CG41 777 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CHRNB1P11230 501 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CYP19A1P11511 503 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 ENO3P13929 434 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 NFKBIAP25963 317 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 TTKP33981 857 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MLH1P40692 756 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 AMPHP49418 695 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 GNAQP50148 359 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 DRG2P55039 364 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CLDN2P57739 230 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 RUNX2Q13950 521 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 PPP2R5BQ15173 497 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 MORN5Q5VZ52 161 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CPLX2Q6PUV4 134 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 BRINP3Q76B58 766 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTAGE6Q86UF2 777 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CAMK1DQ8IU85 385 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CTAGE4Q8IX94 777 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 SRRM1Q8IYB3 904 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 KIAA2013Q8IYS2 634 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC148Q8NFR7 591 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 C16orf52Q8NHV5 167 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 USP6NLQ92738 828 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC47Q96A33 483 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 INTS12Q96CB8 462 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 JAKMIP1Q96N16 626 aaKnown RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZNF396Q96N95 335 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 SDF4Q9BRK5 362 aa4.56□□□□□ -1.68
HMGB1P16-201ENST00000447155 GLIS2Q9BZE0 524 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms