RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 TREX1Q9NSU2 369 aa11.75□□□□□ -0.53
AC009404.1-202ENST00000439955 EURLQ9NYK6 297 aa11.75□□□□□ -0.53
AC009404.1-202ENST00000439955 THAP10Q9P2Z0 257 aaPredicted RBP11.75□□□□□ -0.53
AC009404.1-202ENST00000439955 PHTF1Q9UMS5 762 aa11.75□□□□□ -0.53
AC009404.1-202ENST00000439955 PPIL1Q9Y3C6 166 aa11.75□□□□□ -0.53
AC009404.1-202ENST00000439955 FAM221BA6H8Z2 402 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 TTC34A8MYJ7 566 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 HMGB1P1B2RPK0 211 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 LDB2O43679 373 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 TRIM16O95361 564 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 SYF2O95926 243 aaKnown RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 PDHA1P08559 390 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 NFKBIAP25963 317 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 ATP5DP30049 168 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 ACVR1Q04771 509 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 MGAT5Q09328 741 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 MESP2Q0VG99 397 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 SEPT6Q14141 434 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF234Q14588 700 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 TAF1AQ15573 450 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 QPCTQ16769 361 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 LONRF1Q17RB8 773 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 HNRNPA1L2Q32P51 320 aaKnown RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 KBTBD12Q3ZCT8 623 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 FNDC3BQ53EP0 1204 aaKnown RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 TNFAIP8L3Q5GJ75 292 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 TSTD2Q5T7W7 516 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 PDPK2PQ6A1A2 396 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 BRAT1Q6PJG6 821 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 RAB44Q7Z6P3 723 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 C11orf74Q86VG3 221 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 CAMK1DQ8IU85 385 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 NDUFAF2Q8N183 169 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 RYBPQ8N488 228 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 GABPB2Q8TAK5 448 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 EPS8L3Q8TE67 593 aaKnown RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 STYXQ8WUJ0 223 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 PIH1D2Q8WWB5 315 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 SLC44A1Q8WWI5 657 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 SORCS1Q8WY21 1168 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 FCRL3Q96P31 734 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 LYSMD1Q96S90 227 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 TMEM245Q9H330 911 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 CCDC86Q9H6F5 360 aaKnown RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 NSMCE4AQ9NXX6 385 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 PSMC3IPQ9P2W1 217 aaPredicted RBP11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 SUN2Q9UH99 717 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 ZNF180Q9UJW8 692 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
AC009404.1-202ENST00000439955 CAPN8A6NHC0 703 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 SLC7A4O43246 635 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 PIGNO95427 931 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 PRNPP04156 253 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 NMBRP28336 390 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 GCAP28676 217 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 ATXN3P54252 364 aaPredicted RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 EPHB1P54762 984 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 POLR2LP62875 67 aaKnown RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 ILF2Q12905 390 aaKnown RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 ADGRD1Q6QNK2 874 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 SERPINA13PQ6UXR4 307 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 GDPD4Q6W3E5 623 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 LPCAT2Q7L5N7 544 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 GLT6D1Q7Z4J2 308 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 SLC26A11Q86WA9 606 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 CNTN4Q8IWV2 1026 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 LMNTD2Q8IXW0 634 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 HDDC3Q8N4P3 179 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 DEFB119Q8N690 84 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 OR6K2Q8NGY2 324 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 BLOC1S5Q8TDH9 187 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 PDCD6IPQ8WUM4 868 aaKnown RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 SCG3Q8WXD2 468 aaKnown RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 MFSD3Q96ES6 412 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 CRELD1Q96HD1 420 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 PAFAH2Q99487 392 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 TRIM56Q9BRZ2 755 aaKnown RBP11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 ZDHHC6Q9H6R6 413 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 DKK3Q9UBP4 350 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 IL36AQ9UHA7 158 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 IKBKGQ9Y6K9 419 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 WASF2Q9Y6W5 498 aa11.73□□□□□ -0.53
AC009404.1-202ENST00000439955 A0A0J9YYE9 177 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 TLDC2A0PJX2 215 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 C2orf81A6NN90 581 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 POC1B-GALNT4F8VUJ3 575 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SIN3BO75182 1162 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 TRBC1P01850 177 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 INHBAP08476 426 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 ITPKAP23677 461 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 CNTFP26441 200 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 MSH2P43246 934 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SERPINB9P50453 376 aa11.72□□□□□ -0.53
AC009404.1-202ENST00000439955 SUOXP51687 545 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms