RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 COLGALT1Q8NBJ5 622 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 NETO2Q8NC67 525 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 ELMO1Q92556 727 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 RORBQ92753 470 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 YIPF6Q96EC8 236 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 UBXN10Q96LJ8 280 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC3-203ENST00000407637 REXO4Q9GZR2 422 aaKnown RBP12.78□□□□□ -0.36
HERC3-203ENST00000407637 NIF3L1Q9GZT8 377 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
HERC3-203ENST00000407637 NPAP1Q9NZP6 1156 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 OPTCQ9UBM4 332 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 MFHAS1Q9Y4C4 1052 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
HERC3-203ENST00000407637 NEMP2A6NFY4 417 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 AGAP5A6NIR3 686 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 FAM25AB3EWG3 89 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 FAM25CB3EWG5 89 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 FAM25GB3EWG6 89 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 XPNPEP2O43895 674 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 DNAJB5O75953 348 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 PDGFRAP16234 1089 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 CYP2F1P24903 491 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 RAP1GAPP47736 663 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 YIF1BQ5BJH7 314 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 C4orf19Q8IY42 314 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 AFAP1L2Q8N4X5 818 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 CCDC185Q8N715 623 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 RNF145Q96MT1 663 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 NTPCRQ9BSD7 190 aaKnown RBP12.77□□□□□ -0.36
HERC3-203ENST00000407637 CNPY3Q9BT09 278 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 NAT9Q9BTE0 207 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 SNRNP25Q9BV90 132 aaKnown RBP12.77□□□□□ -0.36
HERC3-203ENST00000407637 C2orf49Q9BVC5 232 aaPredicted RBP12.77□□□□□ -0.36
HERC3-203ENST00000407637 MEAF6Q9HAF1 191 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 DPP3Q9NY33 737 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 OSGIN1Q9UJX0 560 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 NAALAD2Q9Y3Q0 740 aa12.77□□□□□ -0.36
HERC3-203ENST00000407637 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 B4GALT4O60513 344 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 LRIG2O94898 1065 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 IL1R1P14778 569 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 BDNFP23560 247 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 PSMB9P28065 219 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.37
HERC3-203ENST00000407637 CCDC14Q49A88 953 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 PRSS48Q7RTY5 328 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 HID1Q8IV36 788 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 UBQLNLQ8IYU4 475 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 CENPLQ8N0S6 344 aaPredicted RBP12.77□□□□□ -0.37
HERC3-203ENST00000407637 TXNDC5Q8NBS9 432 aaKnown RBP12.77□□□□□ -0.37
HERC3-203ENST00000407637 TTC9Q92623 222 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 PMEPA1Q969W9 287 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 TMBIM1Q969X1 311 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 BDH2Q9BUT1 245 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 POMKQ9H5K3 350 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 NTN4Q9HB63 628 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 ABI2Q9NYB9 513 aaPredicted RBP12.77□□□□□ -0.37
HERC3-203ENST00000407637 MAT2BQ9NZL9 334 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 SEPT9Q9UHD8 586 aaPredicted RBP12.77□□□□□ -0.37
HERC3-203ENST00000407637 POLHQ9Y253 713 aa12.77□□□□□ -0.37
HERC3-203ENST00000407637 WBP11Q9Y2W2 641 aaKnown RBP12.77□□□□□ -0.37
HERC3-203ENST00000407637 A0A0J9YYE9 177 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 TARM1B6A8C7 271 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 GAS2O43903 313 aaKnown RBP12.76□□□□□ -0.37
HERC3-203ENST00000407637 SLC4A1P02730 911 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 CAPN3P20807 821 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 SLC6A2P23975 617 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 PSMB4P28070 264 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 ACTR2P61160 394 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 KIF19Q2TAC6 998 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 ZNF598Q86UK7 904 aaKnown RBP12.76□□□□□ -0.37
HERC3-203ENST00000407637 NT5DC4Q86YG4 428 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 MCRS1Q96EZ8 462 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 MBOAT4Q96T53 435 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 GDF15Q99988 308 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 FAM49AQ9H0Q0 323 aaPredicted RBP12.76□□□□□ -0.37
HERC3-203ENST00000407637 SMURF2Q9HAU4 748 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
HERC3-203ENST00000407637 FAM118AQ9NWS6 357 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 SNX6Q9UNH7 406 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 USP22Q9UPT9 525 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
HERC3-203ENST00000407637 A8MX80 341 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 PDHXO00330 501 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 NPHS1O60500 1241 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 SCO1O75880 301 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 RBP1P09455 135 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 SLC35E2BP0CK96 405 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 IFI30P13284 250 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 CES1P23141 567 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 GGT5P36269 586 aa12.76□□□□□ -0.37
HERC3-203ENST00000407637 DDOSTP39656 456 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms