RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NR2E1Q9Y466 385 aa16.39■□□□□ 0.21
PTCH1-201ENST00000331920 GJB6O95452 261 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 ANKRD13AQ8IZ07 590 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 HEPHQ9BQS7 1158 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 ANKRD12Q6UB98 2062 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 PTPRTO14522 1441 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 METTL21EPA6NDL7 271 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 DDX3XO00571 662 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 RPL3P39023 403 aaKnown RBP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 LRP8Q14114 963 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 CLCA4Q14CN2 919 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 HFE2Q6ZVN8 426 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 NET1Q7Z628 596 aaPredicted RBP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 TBC1D21Q8IYX1 336 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 LRRN4Q8WUT4 740 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 MBOAT7Q96N66 472 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 RIT2Q99578 217 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 OR3A3P47888 321 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 OR3A2P47893 321 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 KYAT3Q6YP21 454 aaKnown RBP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 NPAS2Q99743 824 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 CLK4Q9HAZ1 481 aaKnown RBP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 APOL3O95236 402 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 GLI1P08151 1106 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 MARCH2Q9P0N8 246 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 C1QTNF3-AMACRE9PGA6 284 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 GNRH1P01148 92 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF132P52740 706 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 SCGB2B2Q4G0G5 96 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 OR10H4Q8NGA5 316 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 TAS1R2Q8TE23 839 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 GSC2O15499 205 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 PTDSS1P48651 473 aaKnown RBP16.38■□□□□ 0.21
PTCH1-201ENST00000331920 FAM76BQ5HYJ3 339 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 HECTD3Q5T447 861 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 RNF43Q68DV7 783 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 C16orf86Q6ZW13 317 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 KCT2Q8NC54 265 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 PROSCO94903 275 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 AADATQ8N5Z0 425 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 MAFIPQ8WZ33 124 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 C17orf75Q9HAS0 396 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 MEMO1Q9Y316 297 aa16.38■□□□□ 0.21
PTCH1-201ENST00000331920 IRGMA1A4Y4 181 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 IPO13O94829 963 aaKnown RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 LSM8O95777 96 aaKnown RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 COX4I1P13073 169 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 SSR2P43308 183 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 CSTF1Q05048 431 aaKnown RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 SLC20A2Q08357 652 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 C10orf107Q8IVU9 208 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 S100PBPQ96BU1 408 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 C3orf14Q9HBI5 128 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 YARS2Q9Y2Z4 477 aaKnown RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 MDFIC2A0A1B0GVS7 189 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 FCER2P06734 321 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 LINGO3P0C6S8 592 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 ZFP3Q96NJ6 502 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 ABCG2Q9UNQ0 655 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 DDX3YO15523 660 aaKnown RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 SLC26A4O43511 780 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 CHRM5P08912 532 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 CDK7P50613 346 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 SDR16C5Q8N3Y7 309 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 LINGO1Q96FE5 620 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 IL22Q9GZX6 179 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 MED11Q9P086 117 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 PDP1Q9P0J1 537 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 CFAP97Q9P2B7 532 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 HNRNPLP14866 589 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 NAGLUP54802 743 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 LIPEQ05469 1076 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 RASGEF1BQ0VAM2 473 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 OR6K2Q8NGY2 324 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 OR2AJ1Q8NGZ0 328 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 PPP3R2Q96LZ3 170 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 ACTL7BQ9Y614 415 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 SLC10A7Q0GE19 358 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 GRIK4Q16099 956 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF697Q5TEC3 545 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 PRICKLE1Q96MT3 831 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 OR51V1Q9H2C8 321 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 USP20Q9Y2K6 914 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 ALOX5P09917 674 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 PGDP52209 483 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 DGCR14Q96DF8 476 aaKnown RBP16.37■□□□□ 0.21
PTCH1-201ENST00000331920 RIPOR3Q96MK2 946 aa16.37■□□□□ 0.21
PTCH1-201ENST00000331920 KANTRA0A1W2PQU2 76 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 FPGTO14772 594 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 MLLT6P55198 1093 aaPredicted RBP16.36■□□□□ 0.21
PTCH1-201ENST00000331920 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
PTCH1-201ENST00000331920 FAM110BQ8TC76 370 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms