RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 FBXL20Q96IG2 436 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 CCDC138Q96M89 665 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 HAUS8Q9BT25 410 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 PAIP1Q9H074 479 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 STN1Q9H668 368 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 CACNA2D2Q9NY47 1150 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 ANKRD6Q9Y2G4 727 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 MAGEB3O15480 346 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 OR1I1O60431 355 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 ASGR1P07306 291 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 TRIM25Q14258 630 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 GRB14Q14449 540 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 NR6A1Q15406 480 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 PIK3R6Q5UE93 754 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 FBXL22Q6P050 247 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 PGM2L1Q6PCE3 622 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 GALPQ9UBC7 116 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 AXIN1O15169 862 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 SYNCRIPO60506 623 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 KPNA6O60684 536 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 ZFP28Q8NHY6 868 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 PTERQ96BW5 349 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 HGH1Q9BTY7 390 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 KIFC1Q9BW19 673 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 ARMC7Q9H6L4 198 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 TBC1D13Q9NVG8 400 aa13.65□□□□□ -0.22
NDEL1-204ENST00000578172 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.65□□□□□ -0.22
NDEL1-204ENST00000578172 TOMM70O94826 608 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 ATP6V1B2P21281 511 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 MAPRE2Q15555 327 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 PIGGQ5H8A4 983 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 GPR107Q5VW38 600 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 SMYD5Q6GMV2 418 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 MRNIPQ6NTE8 343 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 POTEHQ6S545 545 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 SAPCD2Q86UD0 394 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 CINPQ9BW66 212 aaPredicted RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 ZYG11BQ9C0D3 744 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 A0A1B0GTL3 188 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 KLHL33A6NCF5 533 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 STX7O15400 261 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 CHEK2O96017 543 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 CCNCP24863 283 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 MTPNP58546 118 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 LSM3P62310 102 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 DDX39BQ13838 428 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 FAM110CQ1W6H9 321 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 TIGD7Q6NT04 549 aaPredicted RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 SIDT2Q8NBJ9 832 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 NTAN1Q96AB6 310 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 SLAMF8Q9P0V8 285 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 CNOT6Q9ULM6 557 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 ASB3Q9Y575 518 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 FER1L6Q2WGJ9 1857 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 DGKQP52824 942 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 YBX1P67809 324 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 MYBPC1Q00872 1141 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 TAF2Q6P1X5 1199 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 KCTD13Q8WZ19 329 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 FCRL5Q96RD9 977 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 CATSPERZQ9NTU4 200 aa13.64□□□□□ -0.23
NDEL1-204ENST00000578172 EIF2B4Q9UI10 523 aaKnown RBP13.64□□□□□ -0.23
NDEL1-204ENST00000578172 C7orf72A4D263 438 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 AZIN1O14977 448 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 CLOCKO15516 846 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 PSMD3O43242 534 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 GSNP06396 782 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 PSMA4P25789 261 aaKnown RBP13.63□□□□□ -0.23
NDEL1-204ENST00000578172 GKP32189 559 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 GDF5P43026 501 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 SH3BP2P78314 561 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 AAK1Q2M2I8 961 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 METTL21CQ5VZV1 264 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 KCTD11Q693B1 232 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 IL27RAQ6UWB1 636 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 ANGPTL8Q6UXH0 198 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 SCD5Q86SK9 330 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 C17orf80Q9BSJ5 609 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 SLC25A23Q9BV35 468 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 GPR63Q9BZJ6 419 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 FAM192AQ9GZU8 254 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 KATNBL1Q9H079 304 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 ATP13A1Q9HD20 1204 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 LRFN2Q9ULH4 789 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
NDEL1-204ENST00000578172 UPK3BL1B0FP48 263 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms